5OQJ


Conserved Protein Domain Family
Tfb4

?
pfam03850: Tfb4 
Click on image for an interactive view with Cn3D
Transcription factor Tfb4
This family appears to be distantly related to the VWA domain.
Statistics
?
PSSM-Id: 397778
Aligned: 22 rows
Threshold Bit Score: 291.497
Created: 26-Apr-2021
Updated: 29-Sep-2021
Structure
?
Program:
Drawing:
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
5OQJ_4           23 PSLLTVIIEIAPKLWTTFDEEgn---ekGSIIKVLEALIVFLNAHLAFNSANKVAVIAAYSQG-IKYLYPXXXxx---xx 95  Saccharomyce...
jgi:OSTLU_39977  12 KSLLVVLVETNPRYWAASEGKgdgtaaaNGLSSVLEATTVFLNSFFALNQQNRAAVIAVHDDG-CHYLYTSPL------- 83  Ostreococcus...
Q8LF41           13 VSLLVLLLDTNPLFWSTTS---------ITFSQFLSHVLAFLNAVLGLNQLNQVVVIATGYSS-CDYIYDSSL------- 75  thale cress
Q6Z2N2           11 VSLAVVVVDTNPLFWATAA---------LPFADFFAHLIHYVNSLLLLNHLNHVVVIAAGLSS-CTYIFDSSD------- 73  Japanese rice
Q09645           50 MSTLSVLIETSSCSWGMLASAhg----dRTIGIILRAIVSFCNAHLGQSANNQLLVFAYGRNVdNKMIYSSTR------- 118 Caenorhabdit...
Q16LU5            7 ASLLVIVMDTNPSQRIIRENP-------HHLTQCLDSIVAFANAHLMQKAQNKLAVLACHHHA-TEFLYPTPG------- 71  yellow fever...
Q9VPX4           15 IDLLVIVLDTNPSQHFVRQNP-------QNLTQILEAVIAFGNAHLMQKAQNKLAVVSCSHHA-TNFLYPLPR------- 79  fruit fly
Q561R7            8 LNLLVIIVDTNPIWWGKQALKes----qFTLSKCMDAVMVLANAHLFMNRSNQLAVIASHIQE-SRFLYPGKNgrlgdff 82  Norway rat
NP_001121894      7 iNILVIVLDVNPVWWGQQAQRep----kFTLSACLDSLMVLANAHLVMSRTNKLAVITSLYHE-SHFLYPSKQ------- 74  zebrafish
O74366           23 PSLLVVILDANPASWYSLSKK-------VPVSKVLADITVFLNAHLAFHHDNRVAVLASHSDK-VEYLYPSIA------- 87  Schizosaccha...
5OQJ_4           96 XXXXXXXXXXXXXXXXX--XXYRRFRNVDETLVEEIYKLFELEKKQIEQNSQrSTL-AGAMSAGLTYVNRIsKESV--T- 169 Saccharomyce...
jgi:OSTLU_39977  84 -----------------------ELNAGDASASATGKKRTKTATPSSRAAMS-SPF-AGALSLALCYCNRAqTLETaaG- 137 Ostreococcus...
Q8LF41           76 ---TSNHGNFESNGTGMpaIFGSLLKKLEEFVTKDEELSKEEVSEDRIPS---CLL-SGSLSMALCYIQRVfRSGH---- 144 thale cress
Q6Z2N2           74 ---ASASGAADVAA-----TFAKASRKMDEFIAEDARATSSNGSVADGNA---ASLlSGALSLALCYIQRVfRSGT---- 138 Japanese rice
Q09645          119 ----------------------CEDRNASFLVVKRLRELLSSDALTNDATIG-APL-GPALAHAFCHMKKDsRVVTadPc 174 Caenorhabdit...
Q16LU5           72 -------KPLDIRQVD---GQYEAFTLVEKTIKQKLAKVISEAPRLTVPTE--SLL-AGSMAMALCYIARVhRNKPa--- 135 yellow fever...
Q9VPX4           80 -------RQVELRQVD---GQYEAFNLVEKTVKQQLGSILMNAPRLSAPCE--SLL-AGSMSMALCYISRLqRNLAp--- 143 fruit fly
Q561R7           83 GDPGNALPDCNPSGSKD--GKYELLTAANEVIAEEIKDLMTKSDIKGQHTE--TLL-AGSLAKALCYIHRAsKAVKd--- 154 Norway rat
NP_001121894     75 -----WRSGEEISANPD--GKYELLSVTNDLFAEEIRNLMERAEVSGSQTE--TLL-AVSLARALCYINRIsKDVQa--- 141 zebrafish
O74366           88 --PEQKVAEVDPTKEA---NTYRKFREVDDLVLSGMKRLMSSTDKVSRK----TMI-SGALSRALAYINQVqn------- 150 Schizosaccha...
5OQJ_4          170 -----------------TSLKSRLLVltcgSGSSKDEIFQYIPIMNCIFSATKMKCPIDVVKIGGskESTFLQQTTDATN 232 Saccharomyce...
jgi:OSTLU_39977 138 -----------------LRVRPRILC----LQASQDNPTDYISMMNAIFSAQRQSIPIDAFAL-GehDLPFLQQAAHITR 195 Ostreococcus...
Q8LF41          145 -----------------LHPQPRILC----LQGSPDGPEQYVAVMNSIFSAQRLMVPIDSCYI-GvqNSAFLQQASYITG 202 thale cress
Q6Z2N2          139 -----------------RHPQPRILC----LQGSPDGPEQYVAVMNSIFSAQRSMVPIDSCIV-GtqDSAFLQQASYITG 196 Japanese rice
Q09645          175 ddslgpqttseqsetasEKATNRAVV----ISITPIMGSEHGSLMNLFFSAAKQSICVDVVSMGDdfTGGILQQAADITG 250 Caenorhabdit...
Q16LU5          136 ----------------gVKINSRILV----VTGSNECASQYMTYMNVFFTAQKQNVSLDVCALDK--PLSLLQQGCDITG 193 yellow fever...
Q9VPX4          144 ----------------gVKMHSRILV----VTGSNECASQYMTFMNVFFTAQKLGITIDTCALDK--TLSLLQQGCDITS 201 fruit fly
Q561R7          155 ----------------nQEMKSRILV----IKAAEDSALQYMNFMNVIFAAQKQNILIDACVLDS--DSGLLQQACDITG 212 Norway rat
NP_001121894    142 ----------------gQEVKSRILV----IKAAEDSTSQYMNFMNVIFAAQKKNILIDACVLDS--DSGLLQQACDITG 199 zebrafish
O74366          151 ----------------kNTLRSRILIf--sLTG--DVALQYIPTMNCIFCAQKKNIPINVCNIEG--GTLFLEQAADATG 208 Schizosaccha...
5OQJ_4          233 GVYLHVESTEGLIQYLATAMFIDPXXXXXXXXXXXXXXXXXTSCYLTGRVVAVGFICSVCLCVLSIIp-PGnkCPACD 309 Saccharomyces ...
jgi:OSTLU_39977 196 GAYVKPTHGAGLLQYLLSTAALDMRSRSHLKLPAARGVDFRASCFCHKRPVSVGFVCSVCLSIFCERrsS---CDTCG 270 Ostreococcus l...
Q8LF41          203 GVHHTPKQLDGLFQYLTTIFATDLHSRGFVQLPKPIGVDFRASCFCHKKTIDMGYICSVCLSIFCEHhkK---CSTCG 277 thale cress
Q6Z2N2          197 GVYLKPQELNGLFQYLAAVFATDLHSRTFLRLPKTLGVDFRASCFCHKKTIDMGYVCSVCLSIFCKYhkK---CSTCG 271 Japanese rice
Q09645          251 GSFLHAKKPQTLLKILMTNMLTDPTHRAVFSKLSHNSVDYRASCACHHQLVSSGWVCSICLSVLCQYt-PI--CKVCK 325 Caenorhabditis...
Q16LU5          194 GQYLKLPQLDGFLQYLLWVFLPEPLTRCKLVLPPPVKVDYRAACFCHRELIDIGYVCSVCLSIFCKFs-PI--CTTCH 268 yellow fever m...
Q9VPX4          202 GQFLKVTQLDGLLQYLLWVFLPAPQIRHKLVLPPPPKVDYRASCFCHRELIDIGYVCSVCLSVFCKYs-PI--CTTCH 276 fruit fly
Q561R7          213 GLYLKVPQMPSLLQYLLWVFLPDQDQRSQLILPPPIHVDYRAACFCHRSLIEIGYVCSVCLSIFCNFs-PI--CTTCE 287 Norway rat
NP_001121894    200 GLYLRVPQKVALTQYLLWVFLPDAEQRSQLLLPPPVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFs-PI--CTTCE 274 zebrafish
O74366          209 GIYLKVDNPKGLLQYLMMSLFPDQNLRKHLNTPNQANVDFRATCFCHKKVLDIGFVCSVCLSIFCEPrvH---CSTCH 283 Schizosaccharo...
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap