Conserved Protein Domain Family
VOMI

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pfam03762: VOMI 
Vitelline membrane outer layer protein I (VOMI)
VOMI binds tightly to ovomucin fibrils of the egg yolk membrane. The structure that consists of three beta-sheets forming Greek key motifs, which are related by an internal pseudo three-fold symmetry. Furthermore, the structure of VOMI has strong similarity to the structure of the delta-endotoxin, as well as a carbohydrate-binding site in the top region of the common fold.
Statistics
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PSSM-Id: 397708
Aligned: 38 rows
Threshold Bit Score: 153.219
Threshold Setting Gi: 268579001
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_002644482 169 SPRTTNWGDWKNWEDCPDGTYAYAAKHKVEDPQGk-GDDTGLNAVALFCNPLNWgethfdhlclatysTeREILSGEGDW 247 Caenorhabditis ...
Q9XX41        24 SARVTNWGDWQEWKRCRDGQFVHAVNLKYEQRQHs-GDDTALNAIALFCKNIGgd-----------fnKqNEIKSGEGAW 91  Caenorhabditis ...
Q7YTQ1        20 VP-------FVGWKVCPNGEFVKGMMIKYQk----gSTTTALDAVALYCAPLYSck----------edKhNWIMSGEATW 78  Caenorhabditis ...
Q9XWI4        24 SPRVTNWGEWTG-KRCPSGQFVRGLRVKYDNAQYf-SDQTGINAIELVCHNrs-------------dqVdTYLKSGEGPH 88  Caenorhabditis ...
Q95YB6        26 SPSLSNWGFWSKVESCPSVSFVHGMRIKYDA-AIs-HDNTALNAIQFVCKHHNqh-----------fdNiTHIIGADGPF 92  Caenorhabditis ...
Q9N5F2        24 SPKVTGWGWWSEMESCPPGYFAHGMRIKYERDSGs-LDETGLNAIELACKNRAvp-----------ssGdTYIKGAEGVF 91  Caenorhabditis ...
CAB16498      26 SPNISTFGTWQPWARCPEGQYANGMRIKFEEWSEd-VEIAGLTAVDLRCAAKGGp------------hSeESVISGESVS 92  Caenorhabditis ...
CAP32923      22 SPRRTDYGDWQGWKNCPDGTYAYAVKHKVEGDQRg-GDDTGLNAVALFCNPLHWst----------ynTnREILSGEGGW 90  Caenorhabditis ...
Q9N2S5        48 SPRVTTFGDWNSWARCRDGEFAYAIQVKVEGKQGsrGDDTGLNAVALYCRPLGSda----------isRnNKIMSGEAPW 117 Caenorhabditis ...
Q9UAX2        24 SPRYTNFGNWHPWSRCRDGEFAYGIQVKVEGDQRg-GDDTGLNAVCLFCRPLGSde----------isReNWINSGEGLW 92  Caenorhabditis ...
XP_002644482 248 GDWK-AVQYCPEgLVMIGFALRSEITRRg-QDDVAA----DNFRGYCgtpdgP-RDHSHSFSGDTp---gWGRWTEDKfC 317 Caenorhabditis ...
Q9XX41        92 GEWQ-GDNICPNnLLIIGFALQSNPDEGk-GDDVGA----NNFAAFCgpphgA-RNKDIELLGNAm---sWGTWTGDHfC 161 Caenorhabditis ...
Q7YTQ1        79 GQWNiQIQWCPSgTTAVGYSIRRSNNHSc----IAQpetlINFQIKCenpyaRdIKKGVWLEGKTe---nCGVWDIKKyC 151 Caenorhabditis ...
Q9XWI4        89 GDWL-ELQYCPEgEYGVGFAIRSAGPLRgrFDDYGV----VNFQLYCgqpngK-RNSWHRLTGVTflnyqKGEWSSNQyC 162 Caenorhabditis ...
Q95YB6        93 GVWQiSFHYCSDgDYVIGFALQSDTSSSg--DGTGA----NNFAAYCgkpdgS-RNNLKLIKDDIpr--eNGKWNDDQfC 163 Caenorhabditis ...
Q9N5F2        92 GGWQ-AYQYCPQgEYVIGFALQSESWRGgnKDDVAA----NNFAAYCgrpeaP-RRRYSWIQGSVn---eRGSWTRDQfC 162 Caenorhabditis ...
CAB16498      93 GTWQ-NVQYCPDdKVIVGFSLKVEELQGn-YDDAGA----LNFAAFCgaqfgA-RNSKVVLQGDTks-vtRGHWTEDLyC 164 Caenorhabditis ...
CAP32923      91 GGWK-GVKYCPEgLVMIGFALRSEADQRg-KDDVAA----DNFCGYCgtpdgP-RDQSNWISGDTp---gWGDWTQDQfC 160 Caenorhabditis ...
Q9N2S5       118 GGWG-GIKYCPNnKVLIGFTLRSEQNQRd-GDDCAA----DNFAGYCgtphgP-RNRDSRIQGDGt---gWGDWTDDQwC 187 Caenorhabditis ...
Q9UAX2        93 GVWG-ARKYCQNtNVLIGFELRSEPDQRg-KDDVAA----DNFAGYCgeplgP-RTKDVWVAGDTp---gWGEWTGAQlC 162 Caenorhabditis ...
XP_002644482 318 pLEFAVCGINSQIEGAQRr-G-DDTALNNIDLRCC 350 Caenorhabditis briggsae
Q9XX41       162 pDGFAVCGIQTQIERSQGgnG-DDTALNNVNIECC 195 Caenorhabditis elegans
Q7YTQ1       152 vNKTALCGINTAVKPYKRk--dIPTGVVDVNIKCC 184 Caenorhabditis elegans
Q9XWI4       163 qSGKVVCGINTQIETDQGwfG-DDTGLNNADLWCC 196 Caenorhabditis elegans
Q95YB6       164 pLGQVVCGIRVQIEPNQGl-A-DDTGLNNVDLQWC 196 Caenorhabditis elegans
Q9N5F2       163 pARQIVCGIIVQIEPAQAphV-DDASLDSVGLKCC 196 Caenorhabditis elegans
CAB16498     165 pTGFAVCGIQARVEKNETqaGiDDTGVNNVQVECC 199 Caenorhabditis elegans
CAP32923     161 pQGFAVCGINTQIEGDQGg-G-DDTALNNVDLRCC 193 Caenorhabditis briggsae
Q9N2S5       188 pEGYAVCGIQSQIEKEQGr-G-DDTAVNNVDLECC 220 Caenorhabditis elegans
Q9UAX2       163 pERYAVCGIQSQIEGDQRg-G-DDTALNNVNVECC 195 Caenorhabditis elegans
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