2J72,2YA1,2YA1


Conserved Protein Domain Family
PUD

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pfam03714: PUD (This model is not part of the current CDD release)
Bacterial pullanase-associated domain
Domain is found in pullanase - carbohydrate de-branching - proteins. It is found both to the N or the C terminii of of the alpha-amylase active site region. This domain contains several conserved aromatic residues that are suggestive of a carbohydrate binding function.
Statistics
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PSSM-Id: 515750
Aligned: 108 rows
Threshold Bit Score: 44.6598
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2J72_A           5 TIVVHYhr------ydG---KYDGWNLWIWP-----VEPVSQegk-------------ayQFTGED--D-FGKVAVVKLP 54   Thermotoga m...
WP_014444133   799 vATLRYqr------paG---DYAGWGLHLWg----dAVDPALlarit--------wdkpmPPTRIG--D-DWAEYDIPL- 853  Actinoplanes...
WP_279643504    37 EALLYYqr------adG---DYNGWGPHLWn----tADCNGSatets--------wtqplAAAETD--PeHGALYRIPL- 92   Stutzerimona...
Q2SQA9          52 QAVIYYkr------edN---NYDGWGLHLWs----aSGAAFSsseyisgg--etswsnplPATGVS--SkYGAYYVIDFD 114  Hahella chej...
Q87FP0          50 EVVIYYkrdiasastaS---DYEGWGLHLWn----gEGCTSTdleamgiagtgtdwsaprPFDGIN--DtYGAYYVLKV- 119  Vibrio parah...
10_pfamImport    1 HIRIHYhr------adA---VYTGWTVYGFGqttedTSNFESgp---------------vQVTGTD--S-FGAFFDVGVV 53  
WP_014643203    43 HIRVHYkr------mdE---EYKDWGLHLWNqd-dqNPAINYvvdw----------gnpvLFENSS--D-WGAYADIPV- 98   Halobacillus...
WP_012486080    87 vVTVYYq--------rLd-kTYSGWGLHLWGsaipaSTVTTWa-----------------NARPFDgtEgDWAVARVPLS 140  Cellvibrio j...
Q6PYZ0          63 ILRVRYh--------rTdgsSYAGWGAHAWGdv-raPTTWDA------------------PLAATL--DdYSTWATFDVE 113  Ostreococcus...
WP_014426502   176 TVRVHYr--------rYd-gGYTNWGLHLWSg---sGLDASRl-----------------PGVTIG--D-WQAAVAFDAM 223  Rubrivivax g...
2J72_A          55 MD-Lt---------------------KVGIIVRlnewq---akdvAK--------DRFIEIk---------dGKAE--VW 90   Thermotoga m...
WP_014444133   854 ADdt---------------------kPVNF-IMhlpn-----gdtVPtsre-pggDRSFLPi----------dSPQ--VW 893  Actinoplanes...
WP_279643504    93 SAda---------------------sCLNL-IMhkddek-----------dlggtDLVWRFd---------eLGRR--VF 128  Stutzerimona...
Q2SQA9         115 SAnw---------------------sSFNL-IMhkgddk-----------dlggqDHTYSKa---------tLGDD--AF 150  Hahella chej...
Q87FP0         120 NPdasd-----------------pheCMNF-ILhkgdek-----------afgssNSKVELt---------kIGESkgLF 161  Vibrio parah...
10_pfamImport   54 AGaSga-------------------qSVGI-IVhmgdt------------kdtpqNEYADPs----------qGSN--FY 89  
WP_014643203    99 ENie---------------------nGLNF-IVhkgdd------------kdtpgDRSFPSs----------gERE--FW 132  Halobacillus...
WP_012486080   141 NGsV----------------------AFNFIVH----------------------KGDFKSptadlgfvpatSGNQ--VW 174  Cellvibrio j...
Q6PYZ0         114 LVsGa--------------------sRVSVLIH------------RGedqdcraeDLDVSa-----------GTRE--VW 148  Ostreococcus...
WP_014426502   224 PGyAagdgeivfdipvlnpkddasrtGLEFIIHgrppggspddkdGR--------DANIAVnyatl--aasgGVGE--IW 291  Rubrivivax g...
2J72_A          91 ILQGVEEIFY 100  Thermotoga maritima
WP_014444133   894 IRQGDPAVYT 903  Actinoplanes missouriensis
WP_279643504   129 TVSGNPQLSS 138  Stutzerimonas stutzeri
Q2SQA9         151 SFSGVGVLYP 160  Hahella chejuensis KCTC 2396
Q87FP0         162 GFHGSSELYY 171  Vibrio parahaemolyticus
10_pfamImport   90 QLSGATSLTT 99  
WP_014643203   133 LVQGDADVYV 142  Halobacillus halophilus
WP_012486080   175 VIQDDNTLYF 184  Cellvibrio japonicus
Q6PYZ0         149 LVSGYSCAFE 158  Ostreococcus tauri
WP_014426502   292 LVEGDATVYT 301  Rubrivivax gelatinosus
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