Conserved Protein Domain Family
PHAF1

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pfam03676: PHAF1 
Phagosome assembly factor 1
PHAF1 and BCAS3 form a complex that affects the recruitment of several core autophagy proteins to the phagophore assembly site.
Statistics
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PSSM-Id: 486552
Aligned: 18 rows
Threshold Bit Score: 357.796
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_001949946  15 EQWEFVLGMHFCQAVAIIQSQVGIIKGVQVLYSDKNPLDIDLILD-LPQDGIRFIFHPVFQRLKMIEIVNLKNIKLKYCG 93 
P34692        33 SQFEFVLGMPINQCIAMIQQHPRMLTKVELKYSKKDPFYQDIIIY-IGSTGIRLYFDGLSQLIKLIEVDNLSMITLTYND 111 Caenorhabditis ...
XP_042936334  15 DYIELLLGMPINQAIAAIQNASRHIQNVELTYSSKEPLSRDVMIR-LAKDGVRLYFEPNSQLLKLIEVYDLSNIILQYGG 93 
KDE06463      19 gLGPFHIGTTLFDVINLLRSHRSTYPTVHLAWDDKAPSTSSIHIQlLKPSPLALRFDAMTQRLLRIQLEGQATPSLIYRG 98 
XP_002676070  11 SMGSFRIGMPISEAIQHLKHLDDKPNAVEILYNEKDPLNNDTIVK-IVEEDIVLYFESKTQRLKLIQINNVKKVKLSYGA 89 
XP_002970764  13 GIGAFSLGMPVCEALAYIEQHHSVFDVVHIKFNDEDPLQFDLVIS-FPEHGFHLRFEPRTQRLRLIEVYDVQRLQMRYAT 91 
Q9SD33        37 GIGPFSIGMPICEAFAQIEQQPNIYDVVHVKYYDEDPLKLDVVIS-FPDHGFHLRFDPWSQRLRLVEIFDVKRLQMRYAT 115 thale cress
XP_040380992  50 GVGPFTLGMPISDAFAQIESQPTLYDVVHVKYFDEEPLKLDFVIS-FPDHGFHLRFDPWSQRLRLIEIYDMKRLQLRYAK 128
XP_009018008  15 EYWEFILGMPLYQAIALIKSQDDLLKNIQLMYNQHNALANDIVLD-LAQDCIRLHFDSYLQRLKVIEVYDMSKIKLKYLN 93 
XP_002125726  15 EQWEFTLGMPIYQAVQIIQRQCRIIKEVHVVYNEKRPFDSDIILN-LINDGIRLLFDSENQRLKVIEVYDMNKMKLKYCG 93  vase tunicate
XP_001949946  94 MVFNSPEVMPTIQQ----VEHTFGATH----------------PGVFDAEKQTFTLNFRGISFCFNVDS-------KFQA 146
P34692       112 TIFSDPNNMATLDR----VNEFFGSTH----------------PGSYDDKHNIYVQSWPGLSFCFPYGGens--nlEVRP 169 Caenorhabditis ...
XP_042936334  94 VVFSSPKDEADVNK----VEGCFGATH----------------PGVYVAEQSLYELSWKGLSFSFPTLNevs--kvQTSS 151
KDE06463      99 KPFTHPSEDSEHQDaktlIRRLLGPTYsspstetsssgpnrhsSAASNSTAKKTMMTYPGVSFELEESNkrgstvsRAMV 178
XP_002676070  90 SIFSGPNVDASFVN----IYNVFGPTY----------------PGEFDTKSNTYKLTYPGLTFVFPIPPmfshlysDGKE 149
XP_002970764  92 SSIGGPSVAATFVA----VYALFGPTF----------------PGSFDAKRNIYTLFYPGLAFTFPIPGqytnccqDREA 151
Q9SD33       116 SMIGGPSTLATFVA----VYALFGPTF----------------PGIYDKERGIYSLFYPGLSFEFPIPNqytdcchDGEA 175 thale cress
XP_040380992 129 SLIGGPSTLATFVA----VYGLFGPTF----------------PGIYDKERGIYTLFYPGLSFAFPIPSqytnlftNGEV 188
XP_009018008  94 EYFNSPSTLPTITQ----IDNCFGATH----------------PAKYNADKTIFSLNFRGLTFIFKILDg-----sSYE- 147
XP_002125726  94 AYFSSPQVHPTVQQ----IDQSFGATH----------------PAQYDEKHHMFVLSFRGITFLFPV---------EHEA 144 vase tunicate
XP_001949946 147 GSAQCgLGSLQFASGTSP-NVSRVIIFSGSPLPg-----------qDILNiPSHPL--SCYKGLTYLERLEVQRDLKNT- 211
P34692       170 GFGGN-LRSLKYDANSQP-KLTKMSIYRGPNPS-------------EPES-VDTPF--SCYCGQNRTRKVEAIWENGNI- 230 Caenorhabditis ...
XP_042936334 152 VDATG-LGSLQFRSNSPP-LLAKMAIYPDSYNS--------------PKP-PRISA--ASLCGVICPVEVKSISDGSRI- 211
KDE06463     179 -------TPLLRPGSNIPiDTAWLH--------------------------PSLPD--DHPKKQGHLDQVEIMLDAQNCp 223
XP_002676070 150 -------LPIEFPNNTTP-IATTIYLFHGHDLAk-----------------PKLPPvkSESTPDSYYEPIIVNLGRG--- 201
XP_002970764 152 E------LPIEFPDGTTP-VMSRVCIYDGALGGnveaganlaalikKAIP-PQLPS------GSLYMEEVHAKLAED--- 214
Q9SD33       176 A------LPLEFPDGTTP-VTCRVSIYDNSSDKkvgvg----klmdRASV-PPLPP------GSLYMEEVHVKPGKE--- 234 thale cress
XP_040380992 189 AD-----LPLEFPDGTTP-VTCRVSIYDSSTDSkvgvg----slmdKAVV-PALPA------GSLYMEEVHAKLGEE--- 248
XP_009018008 148 ---------------TSP-VVTSLFIYSGQSLT-------------DAIV-PSIPS--SCFYAGLYLEKFD--------- 186
XP_002125726 145 FNGHS-LRSL--PNTSTP-VVAKMSIYTGNNLS-------------ETRA-PSMPP--SCYHGNLYSKCTEILLDNGKC- 203 vase tunicate
XP_001949946 212 KGFMIQLYLEGsg----sNRG----RKVTYNREINFGMSC-QDVTSMLGTPSQIFYKSEDKMKIHSPNVHRHISvPRRSD 282
P34692       231 VGIDIQFDTQNg------RIVdgeyDVSTYTRQIYFGDSV-SDVQSILGAPTKVFYKSDDKMKIHRGLHKETLY-GP-PN 301 Caenorhabditis ...
XP_042936334 212 SGLFFIFAAETplpdsssRKQa--fGLRKIEQSIFFGDTA-ESVLSSLGAPSKVFYTKADRMLIHRGEDSRKLR-GPRPN 287
KDE06463     224 TSVKLVFYPHes------------pSTSHDAVEFKIGQSTsEDIMCDLGSAVRSFWKEDDRMSIHSSPDATALAaLDPNP 291
XP_002676070 202 ----IELSYS--------------------KKKIKFGYST-QDVLMILGAPDKIYYKRNDKLRIHAIGAGQSQT--VGND 254
XP_002970764 215 ----LFFTTS--------------------KKRLPFGASP-QDVWAELGRPDGIHQKQVDPMVIHSASDPRPNS-ALCGD 268
Q9SD33       235 ----LYFTVG--------------------GQHMPFGASP-QDVWTELGRPCGIHPKQVDQMVIHSASDPRPKT-TICGD 288 thale cress
XP_040380992 249 ----LLFTTG--------------------GQHIPFGASP-QDVWTELGRPCGIHQKQVDQMVIHSASDPRPRT-TLCGD 302
XP_009018008 187 -GDRLMQAADEas----pYSSi---HYATILQEINFGDTT-QDVISKIGSPSRMHYKDYDKMKIHCPKKHNMCY--NTSD 255
XP_002125726 204 SGLQMQLVSGGa-----gHAme--lNCSTLIRRVRFGDTV-QDVLTEIGSPCQTFYKLEDKMRIHSASPHKLSP-TQHSD 274 vase tunicate
XP_001949946 283 YFFNYFTLGFDILFDAKTHKIKKFIVHTNFPGHYNFNIYHRCEFNIALTSEKskfnlsndckkydkkskpitVNTFTKWD 362
P34692       302 FFFNYFVMGLDILFDFVSKRVVKFVLHTNAPGHCDFGMYSRCNFSIFLNDKQy------------------eIRTDSKFD 363 Caenorhabditis ...
XP_042936334 288 YFFNYFSLGLDILFDCITNRVQKFVLHTNLPGHFDFGIYARCNFCVTINGGPt-------------------ITPSSKRE 348
KDE06463     292 YFLSYPSLGITFLVHGSKHHLLKVILHSNLPGEVNFGRTHRCRWALVDSSGAr-------------------IGCEQPFT 352
XP_002676070 255 YFYNYFSMGFDIMFGGNTHTVQKIMLHTNFPGSVDFNTYSKCNFSIPVSQFEfqekr-----------enqfIGPDEKFS 323
XP_002970764 269 YFYNYFARGLDILFDGQTHRIKKFVLHTNFPAHTDFNSYIKCNFVIHCPLTGsdekd-----------shyvITGDTKWP 337
Q9SD33       289 YFYNYFTRGLDILFDGETHKVKKFVLHTNYPGHADFNSYIKCNFVISAGADAaeanr-----------sgnkITPSTNWD 357 thale cress
XP_040380992 303 YFYNYFSRGIDILFDGQTHRIKKFVLHTNFPGHSDFNSYMKCNFVIYdteaegtdq--------pgnipkncITPRTKWE 374
XP_009018008 256 YFFNYLNYGVDILFDARTHVVKKLVMHTNFPNHFNFNIYYRCHFQIPLSVSRnlssfdsd----elvlnnnfITFDTKWS 331
XP_002125726 275 YFYNYFTLGLDILFDGNSHRVKKFVLHSNHPGHYNFNIYYRCEFKIDLFSENds----------------faIVPSTRWQ 338 vase tunicate
XP_001949946 363 EISEKL-KH---S-------------------------ERPVVLNRGS---SENSTNPFGSTFCYGYQDMVFEVMQ-NQH 409
P34692       364 EFSHAFmNDs-nP-------------------------PRPVVLARQE-------QQPFGSTFCYGIKQIIVERTE-NGF 409 Caenorhabditis ...
XP_042936334 349 DFFGAFcGDt--A-------------------------VQPVVLSRSG------TENPFGSTFCYGTDQVIVEVMD-NGF 394
KDE06463     353 KVKTRLvGGsprPgspkgeskgekddlmaekglkgfsmEKPMILDRTAdggEGSEV-KGKTTEIHGFPGVAFEVTN-SGD 430
XP_002676070 324 NVQKILdGTp--C-------------------------SKPIVHDHTK------ANNPFGGTKFFAFRNCIFEVISrNDH 370
XP_002970764 338 QIQQLLgDA-----------------------------GRAAIQTQGS------VSNPFGPTFVYGYRNIAFEVMK-NGH 381
Q9SD33       358 QVKEILgEC-----------------------------GPAAIQTQGS------TSNPFGSTYVYGYQNVAFEVMK-NGH 401 thale cress
XP_040380992 375 QVKEILgDC-----------------------------GRAAIQTQGS------MNNPFGSTFVYGYQNIAFEVMK-NGY 418
XP_009018008 332 SVMKYLiTP---H-------------------------TKPVVRNRMY------DNQLFREIHCFGCNEFIFEVMS-CDQ 376
XP_002125726 339 SVMNAL-EDhfvI-------------------------GEPVVLNRAS---STNTTNPFGSTFCYGVQNLIFEIMG-NDY 388 vase tunicate
XP_001949946 410 IASITFY 416
P34692       410 LTSVTIY 416 Caenorhabditis elegans
XP_042936334 395 IASVTLF 401
KDE06463     431 VETVWLF 437
XP_002676070 371 INSLTLF 377
XP_002970764 382 IATVTLF 388
Q9SD33       402 IATITLF 408 thale cress
XP_040380992 419 IATVTLF 425
XP_009018008 377 IASVTVY 383
XP_002125726 389 IASVTIY 395 vase tunicate
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