6WW7,6Z3W


Conserved Protein Domain Family
UPF0172

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pfam03665: UPF0172 (This model is not part of the current CDD release)
Uncharacterised protein family (UPF0172)
In Chlamydomonas reinhardtii the protein TLA1 (truncated light-harvesting chlorophyll antenna size) apparently regulates genes that define the chlorophyll-a antenna size in the photosynthetic apparatus. This family was formerly known as UPF0172.
Statistics
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PSSM-Id: 515730
Aligned: 77 rows
Threshold Bit Score: 141.207
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6WW7_H         4 VKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRKehlplggpgahhTLFVDCIPLFHGTLALAPMLEVALTLIDSW-- 81  human
CCA69876     282 LVLSHQAYLSMLLHASKHPHRAVNGVLLGPTSGGSE------------IVVEQVIPLLHHWTTLSPMMELGLELASTY-- 347
XP_001836039   7 LTVASKAYLKIYFHAAKHLHQTINGVLLGNQTGGK-------------IVVEDAIPLLHHWTSLSPMMEIGLDLAEQY-- 71 
XP_007329869   5 YTITGPAYIKLFFHLAKHPHQRVNGVLIGKELSEGV------------VEATDAIPLLHHWTSLSPMMEIGLDLAGQY-- 70 
XP_003033976   4 YTFSDDAYLKLFFHCAKYPHRAVNGVLLGTEAGDE-------------VQITDAVPLLHHWTHLSPMMEIGLDLAATY-- 68 
XP_001876096   5 YTISAQAYYKIFFHAAKHPHRAVNGVLVGKQTSSGGe-----------VEISDAIPLLHHWTSLSPMMEIGLDLAGEY-- 71 
ESK91593       4 YTIHPTAYFKIFFHAAKHPHRQVNGVLLGVGTGNA-------------VEIQDAVPLLHHWTSLSPMMEIGLDLAGRH-- 68 
KDE08456      20 YTLSPLAYLKLVLHASKYTSCSVCGLLVGSTSSSSSsa---------lTTITDIIPLLHQWTTLSPMMEAALQMADLHlq 90 
XP_001731337   9 VDVSPLAYRKIVYHSAKYLSSTVVGVLVGTKSQSNKp----------nTTVTDIIPLVHHWHTLSPMTEAGMALVEAH-- 76 
GAC72176       7 VRVSPLAYKKLVLHAAKYPTSRVLGLLLADSSSSSE------------LLITDSIPLSHHWTSLAPAAEAALSLATSY-- 72 
6WW7_H        82 CKDHSYVIAGYYQANERVKDASPNQVAEKVASRIAEGFS--D-------TALIMVDNTKFTmdcv-aptiHVYEHHE--- 148 human
CCA69876     348 AANSGLRVVGYYQASPTVHSQGLGPVGEKIVSRLRASVP--D-------AAGILIHLDEL-------------------- 398
XP_001836039  72 AAEANLKIVGYYQGRAAVGDVGLGPVGEKITQRIKEKFA--D-------AFALTLDGEDFgtek---aalVVWTYTE--- 136
XP_007329869  71 AESAGLKVVGYYQACERPEDTTLFPVGEKIASRIKQGFN--H-------AIAFVLDASQIdgts---aalVPYVPAAp-n 137
XP_003033976  69 AASVGMKLVGYYQACERLDDTALTPVGEKVARRIRDSFA--N-------AAAFVIDGEQIgtgs---aalVPYTFNTs-t 135
XP_001876096  72 ATSSGMKLVGYYQACERLDETALVPVGEKVAGRVQAGFG--D-------AIAFVIDGEKIgtgv---aalIPYTFQPs-s 138
ESK91593      69 AESSGMKLVGYYQACERLDETALAPVGEKVASKIKESFK--D-------AVAFVIDGERLgtdh---palFPYVSQSp-- 134
KDE08456      91 SKRTETTFVGLYLANSRLSDLSIPPTLQLVADKLRSRFP--S-------AVVLVVDNEHLDsttqlpllaHTYSPSS--- 158
XP_001731337  77 LGKTGGTLLGLYEVPERLDQKIPSPTTTALAETLEKKTGtaPlvlhmngAKLLEVDGai----------hATVSGQSvqa 146
GAC72176      73 AATRKLVVVGVYEAPELVATVAPSTHALRLAEKIAG-LArrE-------AVLVRVNNa------------TILNPNTham 132
6WW7_H       149 NRWRC--RDPHHDYCEDw----------------pEAQRISASLLD---SRSYETLVDFDNHLDDIRNDWTNPEI 202 human
CCA69876     399 ----R--SKSSKTTPGIvangsnq----melqdrnSPARTLELI-S---TGLQTRFYDFDDHLENVHLDWLKNEA 459
XP_001836039 137 NQWRRigSSGASPPFTSgssiq--------ldspdLPQKALSYVRD---KSLHLQFGDFDDHLEDVKIDWIHNRE 200
XP_007329869 138 PNWKP--ASSSPQPFTVdspyq--------lsppnLASRALALVRD---EKLHLKFGDFDDHLEDVAIDWLRNKA 199
XP_003033976 136 SSWTR-----SSSSFTEgspyr--------ltstdIPLRAVKLVRQ---EQREKKFGDFDDHLEDVTIDWLRNKA 194
XP_001876096 139 KAWRP--CSENPLPFVPgsrfk--------lasndLPVQAISLVQD---QHLHQAFGDFDDHLEDVAIDWLQNRA 200
ESK91593     135 STWRP--SNEAYAAFTSessfk--------lsspdLPKRAVELVRD---THAQQIFGDFDDHLEDVTIDWLRNRE 196
KDE08456     159 KSYNP--LPPSSSSSSLi----------------lSDPSILSTTLTrvqQGDSTLIGDFDDHLADPSVDWLTNPR 215
XP_001731337 147 qv-----------------------------arpeALSLALSQELD---QGAWKFLYDWDDHLENTQLDWLTNPD 189
GAC72176     133 TAYPV--AM---AQGKTeqkpkplkqealtlqqpdQVQKLYDAMNT---SGDWEHLVDFDDHLENPALDWLQNPA 199
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