Conserved Protein Domain Family
TCP

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pfam03634: TCP (This model is not part of the current CDD release)
TCP family transcription factor
This is a family of TCP plant transcription factors. TCP proteins were named after the first characterised members (TB1, CYC and PCFs) and they are involved in multiple developmental control pathways. This region contains a DNA binding basic-Helix-Loop-Helix (bHLP) structure.
Statistics
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PSSM-Id: 515709
Aligned: 42 rows
Threshold Bit Score: 140.563
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q67WL3        57 TSTKDRHTKV--DG--RGRRIRMPAICAARVFQLTRELGHKTDGETIEWLLQQAEPAVIAATG---------------TG 117 Japanese rice
NP_001234598 105 TGKKDRHSKIctAQgvRDRRVRLSLHIARKFFDLQDMLGFDKASKTIEWLFSKSNNAIKDLSEntpqkeysdgnkiviNS 184
NP_001233815  94 TSTKDRHTKV--DG--RGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATG---------------TG 154
NP_001234594  88 TTTKDRHTKV--DG--RGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATG---------------TG 148
XP_006363220  83 TTTKDRHTKV--DG--RGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATG---------------TG 143
XP_004965036  62 TSTKDRHTKV--DG--RGRRIRMPAICAARVFQLTRELGHKTDGETIEWLLQQAEPAVIAATG---------------TG 122
XP_044957766  57 TTSKDRHTKV--DG--RGRRIRMPAICAARVFQLTRELGHKTDGETIEWLLQQAEPAVIAATG---------------TG 117
Q53PH2       150 RPTKDRHTKV--EG--RGRRIRMPALCAARVFQLTRELGHKTDGETIEWLLQQAEPAIVAATG---------------TG 210 Japanese rice
EFH52114     109 ASTKDRHTKV--DG--RGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATG---------------TG 169
Q93Z00       115 ASTKDRHTKV--DG--RGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATG---------------TG 175 thale cress
Q67WL3       118 TIPANFTSLNISLRSS-GSslsipshlrlaglagprfgggaraadawdr------------vvglgfggaadapssatss 184 Japanese rice
NP_001234598 185 NNSSSYEGKSDSFMSE-CEen----------------------------------------------------------- 204
NP_001233815 155 TIPANFTSLNISLRSS-GSsmsvpsqlrssyfnpnfslsqrr--------------------------slfqgiglssdr 207
NP_001234594 149 TIPANYSSLNISLRSSrHHsasnylahnhnnfgh------------------------------------------vyhd 186
XP_006363220 144 TIPANYSSLNISLRSSrHHsasnylahnninnfgh-----------------------------------------vyhd 182
XP_004965036 123 TIPANFTSLNISLRSS-GSsfsipahlrapglpgtrfggargdpwdrv---------------vglgfggaegppsatss 186
XP_044957766 118 TIPANFTSLNISLRSS-GSmlstipahlraaglpgsrfgggpradawdr------------fvglgfggglespasttts 184
Q53PH2       211 TIPANFSSLAVSLRSAaSHssspraapfhhlqqq-------------------------------------------qqh 247 Japanese rice
EFH52114     170 TIPANFTSLNISLRSS-GSsmslpshfrsaastfspnnmfspamlqqqqqrggg---gfhhphlqgrattsslfpgidnf 245
Q93Z00       176 TIPANFTSLNISLRSS-GSsmslpshfrsaastfspnnifspamlqqqqqqqrgggvgfhhphlqgraptsslfpgidnf 254 thale cress
Q67WL3       185 sssplllsfhsG--------------SVGLDvsppsa-stspaAADLSRKRRWEQEMQQQQQYQ 233 Japanese rice
NP_001234598 205 ------------------------siNELGKdkekimqnnphkRESREKARARARERTKEKMMI 244
NP_001233815 208 satttllnfqtGnsnlhqfqakqemrDNSLDlte------tsiEESLSRKRRQDLDLQQEQQQN 265
NP_001234594 187 rnyfngvglfsSennsffpsgnlnmlQAKEElcddhddndndnDNNTGRIKRRSEDQDLLQNNY 250
XP_006363220 183 rnyfngvglfsSennsffpsgnlnmlQAKEElcdddd-ddndnNNNTGRIKRRSEDQDLLQNNY 245
XP_004965036 187 assplllsfhsG--------------SVGLDvspss--ssaaaSSDLSRKRRWEQEMQQQQQQQ 234
XP_044957766 185 sssplllsfhsG--------------SVGLDvspss--saaaaSTELSRKRRWEQEMQQQQQQh 232
Q53PH2       248 dvaamlgfhhhHhqllppppphqhpePTPQDp----------gAGEFMRKRYREADDLFKDTSR 301 Japanese rice
EFH52114     246 tpttsflnfhnP------------------------------------TKQEGDQDSEELNSEK 273
Q93Z00       255 tpttsflnfhnP------------------------------------TKQEGDQDSEELNSEK 282 thale cress
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