3SXU


Conserved Protein Domain Family
DNA_III_psi

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pfam03603: DNA_III_psi 
DNA polymerase III psi subunit
Statistics
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PSSM-Id: 397592
Aligned: 39 rows
Threshold Bit Score: 59.5456
Threshold Setting Gi: 386272864
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3SXU_B                3 TSRRDWQLQQLGITQWSLRRP-GALQGEIA--IAIPAH-VRLVMVANDLPALTDP-LVSDVLRALTVSPDQVLQLTPEKI 77 
Q7MI30                7 TENEKLYLQEMGISLWQLHHP-ERMMGYEMptFSLPEE-CQLLLIAPSCPISQTAlFFEKVLKSMQLELSQARHITPEQL 84  Vibrio v...
CAV19628              2 SQTHAQYLQEMGISQWELSHP-ERLAGYESelTLLSND-CKLLLVSPEKPQDDLAvMFERVLKSIKLDLSQALHVQPQHL 79  Vibrio t...
Q9KU67                1 mlSSSHYLSAMDIQQWELIHP-ERLAGFQPrtQTLDHD-CRLLLVANQPPQGAEIlLLERILKSFQLELSMVRYIAPIQL 78  Vibrio c...
JLExeter:vfu_A00953   2 SDRQQHYLHAMGIQSWDLVHP-ERLQGYQPtlAPLDDE-CRLVLVSDTYPTAAEAlLFERVLKSFHVPLAAARHVFPHQL 79  Vibrio f...
Q87M16                2 SINEKQYLHEMGITSWELIHP-ERLAGYQPptIDLPSS-CKLLLVSPICPTNETAiLFEKILKSMKLTLEQAMHIEPERL 79  Vibrio p...
Q5E7K3                2 PQQALQFLNEMDISVWQVRQT-SYFPALENttLSLPET-CQLLFVAPAIPTERDAfLFGKVLASMKLSPEQALFLSSESL 79  Aliivibr...
Q6LUI1                2 KQRDIQVLQEMGLTYWQVRKP-EFFPNMQVpvIDLPES-CKLLFITDNELNEHDAwLFGRILGSMKLTPEQALSLPLEAV 79  Photobac...
jgi:Q7C_2657          4 ttlQRQVLREMGIPAWQQRGQ-AAAQAMSTkqLVIQAP--YLILLTTPLSAMAQR-LLVNILTAVNIGDANTQVEVEQTF 79  Methylop...
UNSW:PCNPT3_01780     2 QHKKALYLQEMGITRWLLRNGqGFTYLQTK--LPLVLStCQLLIICAEQDRVAP--LLMNILKAFNIKAEQVYYCTMSEF 77  Psychrom...
3SXU_B               78 --AMLP-QGSHCNSWRLGTDEPLSLEG-AQV-----AS-------PALTDLRANPTARAALWQQICT 128
Q7MI30               85 --STLE-PHSLQWVWFAGCPVQPLPMVaKVL-----QS-------PELAQIDGHNEHRRALWQQIRS 136 Vibrio vulnificus YJ016
CAV19628             80 --SAVD-LSSVEWVWFAGCESAHE-LKaKTL-----QS-------PLLSDINGNNQHRRDLWQQICA 130 Vibrio tasmaniensis L...
Q9KU67               79 --SQLA-YTGLEWIWFAGCDPLSH-QAqKQL-----HS-------PRLSDIDGNTQYRRALWQQICA 129 Vibrio cholerae
JLExeter:vfu_A00953  80 --AQLD-LSGLAWIWLAGVEVDVD-TSaNRL-----TS-------PALADIDGHTQHRRDLWQQICS 130 Vibrio furnissii NCTC...
Q87M16               80 --AMLG-EHQLEWVWFAGCESNSM-ENaKQL-----TS-------PLLQDIDGNNEQKRALWQQICS 130 Vibrio parahaemolyticus
Q5E7K3               80 --EYIG-EHHLDWCWFSGVSTTEL-EGvKIL-----TS-------PLLSEMHSNTQSRRDLWRQICS 130 Aliivibrio fischeri E...
Q6LUI1               80 --EQVA-EHHLTWCWFAGCQGAHP-VGcQVL-----NS-------SSLQAMHSNPSSKKALWQQICS 130 Photobacterium profundum
jgi:Q7C_2657         80 seLSDPqSQLHHVLYFSA-----------QVpasllTDtgklihlPDLEHVIHQPAQKAEIWSllqp 135 Methylophaga frappieri
UNSW:PCNPT3_01780    78 --LQLK-ADLPALIWSTLGAIDENITGsHVL-----TS-------PPLSQLCLDANKKKQLWKQYCD 129 Psychromonas sp. CNPT3
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