Conserved Protein Domain Family
Herpes_ICP4_C

?
pfam03585: Herpes_ICP4_C 
Herpesvirus ICP4-like protein C-terminal region
The immediate-early protein ICP4 (infected-cell polypeptide 4) is required for efficient transcription of early and late viral genes and is thus essential for productive infection. ICP4 is a large phosphoprotein that binds DNA in a sequence specific manner as a homodimer. ICP4 represses transcription from LAT, ICP4 and ORF-P that have high-affinity a ICP4 binding site that spans the transcription initiation site. ICP4 proteins have two highly conserved regions, this family contains the C-terminal region that probably acts as an enhancer for the N-terminal region.
Statistics
?
PSSM-Id: 281570
Aligned: 3 rows
Threshold Bit Score: 601.985
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
P08392  812 GGWRRQPPGPSHTAAPAAAALEAYCSPRAVAELTDHPLFPVPWRPALMFDPRALASIaARCAGPAPaaqaacggGDDDDN 891  Human alphaherpesvi...
Q9DGT6 1861 AAFRQFPVGTVIGQTPPQSVLNAYCPNGAFVELVEFARIPEPWQEVLRYSPEAMADI-ARVANALP--------GKYNSN 1931 Marek's disease her...
P09310  750 GGFRRIPRGALHTPVPSDQARKAYCTPETIARLVDDPLFPTAWRPALSFDPGALAEIaAR----RPg------gGD---- 815  Human herpesvirus 3...
P08392  892 PHPHGAAGgRLFGplRASGPLRRMAAWMR-QIPDPEDVRVVVLYSPLPGED----LAGGGASGGPP---EWSAERGGLSC 963  Human alphaherpesvi...
Q9DGT6 1932 EIITSAAS-EAFH--TATSKLRARTAWMRyQQESPDDVSIVVLYSPLPGEH----LFCVPAPDTPPgglKFDNKRGGLSF 2004 Marek's disease her...
P09310  816 ---------RRFGppSGVEALRRRCAWMR-QIPDPEDVRLLIIYDPLPGEDingpLESTLATDPGP---SWSPSRGGLSV 882  Human herpesvirus 3...
P08392  964 LLAALANRLCGPDTAAWAGNWTGAPDVSALGAQGVLLLSTRDLAFAGAVEFLGLLASAGDRRLIVVNTVRACDWPADGPA 1043 Human alphaherpesvi...
Q9DGT6 2005 LLAAFSNRLCLPKSSAWAGRWKAAPDISPLTRMGVLFLSTEDLGYQGAVEYLQRQCMKRKKKLIIMDTVEDRYRLPNGPC 2084 Marek's disease her...
P09310  883 VLAALSNRLCLPSTHAWAGNWTGPPDVSALNARGVLLLSTRDLAFAGAVEYLGSRLASARRRLLVLDAVALERWPRDGPA 962  Human herpesvirus 3...
P08392 1044 VSRQHA-YLACELLPAVQCAVRWP---AARDLRRTVLASGRVFGPGVFARVEA-AHARLYPDAPPLRLCRGGNVRYRVRT 1118 Human alphaherpesvi...
Q9DGT6 2085 IIEEATrYMKCIISPRSQCCVRWP---GLLDFGTTIITSRDVVGPLTLMDLEQyYYCEIGIEDSTINLCCTGNVRYTVET 2161 Marek's disease her...
P09310  963 LSQYHV-YVRAPARPDAQAVVRWPdsaVTEGLARAVFASSRTFGPASFARIET-AFANLYPGEQPLCLCRGGNVAYTVCT 1040 Human herpesvirus 3...
P08392 1119 RFGPDTPVPMSPREYRRAVLPAldgraaasgttdamapgAPDFCEEEAHSHAACARWGLGAPLRPVYVALGREAVRAGPA 1198 Human alphaherpesvi...
Q9DGT6 2162 RLEDVSCVPTTPLFYFAAVKHV-----------------RPDFLCGETYSNRAARKWGLCAPLRPIYVIESKMNAIVSPS 2224 Marek's disease her...
P09310 1041 RAGPKTRVPLSPREYRQYVLPGfdgckdlarqsrglglgAADFVDEAAHSHRAANRWGLGAALRPVFLPEGRRPGAAGPE 1120 Human herpesvirus 3...
P08392 1199 RWRgP--RRDFCARALLEPDDDAPPLVLR-----------GDDDGPGALPPAppgIRWASatgRS-GT 1252 Human alphaherpesvirus 1 strain 17
Q9DGT6 2225 FLH-Pt-ARNLCRSVILPPDPEARPVVVHipegt--csalAEDMVASIRSSC---ITWGQ---HEeGG 2282 Marek's disease herpesvirus typ...
P09310 1121 AGDvPtwARVFCRHALLEPDPAAEPLVLPpvagrsvalyaSADEARNALPPIp-rVMWPPgfgAAeTV 1187 Human herpesvirus 3 strain Dumas
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap