2Y0L,3T24,3SY7,4FRT,4FT6,2Y2X,4FSP,4FRX,3SY9


Conserved Protein Domain Family
OprD

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pfam03573: OprD (This model is not part of the current CDD release)
outer membrane porin, OprD family
This family includes outer membrane proteins related to OprD. OprD has been described as a serine type peptidase. However the proposed catalytic residues are not conserved suggesting that many of these proteins are not peptidases.
Statistics
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PSSM-Id: 515672
Aligned: 49 rows
Threshold Bit Score: 411.993
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2Y0L_A  12 AGFLEDSKASLETRNFYMNRDFRD---------GPGQ-----------SKRE--EWAQGFILNLQSGYTQGTVGFGLDAM 69  Pseudomonas aeruginos...
Q88R66  28 KGFIEDSHANVLLRNAYINRDKKH------------------------GTDDqiEWGQAFIANFSSGFTQGTVGVGVDAF 83  Pseudomonas putida KT...
Q87UB4  28 KGFVEDSRLTVNLRNAYINRDYKN------------------------DREDksEWGQAFMGTFASGFTQGTVGVGVDAF 83  Pseudomonas syringae ...
Q9I6U5  28 GGFVEDSELQFLARTYYFNRDYRDs-------pNNAGrnrfkprsernGYRE--EATQGLRLQFASGYTPGSLGFGLDAH 98  Pseudomonas aeruginosa
Q9I0E2  32 PDYL---EWRLLNRNYFLYNDYRRa--------DAGR-----------GYRK--EWAHGLIVDLESAYTPGRVGFGLDLH 87  Pseudomonas aeruginosa
Q9I161  51 PGFVEGSTLNGFIRNYYFARDNHDt----------------------pSRRDqrEWAQGLMLSFRSGYTDTPIGIGLDAH 108 Pseudomonas aeruginosa
Q88PP9  30 DGFIEGSSFNLHFRNAYFNRDNHNa-----------------------GVRDtrEWGQGAVARFESGYTPGVVGFGLDAH 86  Pseudomonas putida KT...
Q9I6X0  29 EGFIEGSSLQLLTRNYYFNHDRRHa-----------------------SGHDskEWAQGFIATFQSGYTPGVVGFGVDAY 85  Pseudomonas aeruginosa
Q88J95  58 EGFIDGTRVHVLNRNFFFSQDYRNgdftlnpnnGERQ-----------SLHR--EWGHGIIANLQSGFTRGTVGFGVDVQ 124 Pseudomonas putida KT...
Q88AM0  30 EGFIEGSTLTVLNRNFYMNRDHRNg--------ESSPtg--------nGYSE--AWAHGIIGRFQSGFTQGTFGVGVDAF 91  Pseudomonas syringae ...
2Y0L_A  70 GMLGVKLDSGRGRSG-TGL-------LP-------KD-SD----GRAPDTYSKLGLTAKVKVSQSELKVGTLIPKLPSVQ 129 Pseudomonas aeruginos...
Q88R66  84 GLYAVRLDGGKGHNGgGGVdffkpheTT-------NAeGN----ASSPHNLARGGAAVKFRISNTVLKYGDQMPALPVLQ 152 Pseudomonas putida KT...
Q87UB4  84 ALYGIRLDGGKGRSGnGGIdffkqgdS-----------------GAAADDLSRAGAAVKARFSKTVIKYGDQMPQLPVLS 146 Pseudomonas syringae ...
Q9I6U5  99 AMLGLQLDSGGGRTG-TGN-------LP-------VG-AD----GHPDHRYGKVGGALRLRHGETRLKYGQTTTSAPVFA 158 Pseudomonas aeruginosa
Q9I0E2  88 GFAGFKLDGGRGHAG-TGL-------LP-------LD-SS----GDNASEYSDAGAALKLRLGESLLKVGEMTVETPVFD 147 Pseudomonas aeruginosa
Q9I161 109 AFYGLRLDGGGGSGG-AGV-------LP-------LD-SA----GRPADSFSAAGAALKLRGLDSLLKIGDQLLENPVIA 168 Pseudomonas aeruginosa
Q88PP9  87 AMLGLKLDGGGGHAG-TSI-------LP-------EHiKDdgelGAAPHSFSTAGAAVKLKAFDTELKAGDLFLTNPVIA 151 Pseudomonas putida KT...
Q9I6X0  86 GMLGLKLDGGGGTGG-TSI-------LPits-pskEGyES----GKAPDEFSSGGAALKIRAFDTELKLGDQFLSNPVVA 152 Pseudomonas aeruginosa
Q88J95 125 GLVGLKLDGGNGAVG-NGVg------VPgivsrsgSN-FD----GEPKDSYGKVGTALKVRAFDTELRYGDVSPTSPVLH 192 Pseudomonas putida KT...
Q88AM0  92 AMIGIKLDTGDGRNGgRSPfd----vMP-------VD-GD----GSARDEYTKVGGSLKARAFDTVVNVGDVFPSTPVVA 155 Pseudomonas syringae ...
2Y0L_A 130 PNNGRIFPQIFEGALLTSKEIKDLGFTAGRLEKTKIRDSSDSE-DLALndkNGR-------FAGVSADHFDLGGLDYKLT 201 Pseudomonas aeruginos...
Q88R66 153 YDDARLLPESFTGTLITSKEIQGLELNAGRFTQEARKSAERRD--------------------GGGLKSINVLGGSYKFT 212 Pseudomonas putida KT...
Q87UB4 147 YDNSRLLPESYTGTMITSKEIDGLEVVAGRFTQEARKSAEGRD--------------------SGDLKSINVYGASYKFT 206 Pseudomonas syringae ...
Q9I6U5 159 ASSNRTLAGMAYGLLLEDRSFDGLLLEGGRFTAASGPGESKVRgDIST---VYGrl----gAYPVRLDAVGFLGGQWQAT 231 Pseudomonas aeruginosa
Q9I0E2 148 TSDKRLQPQYARGFFLQSDDLDRVRIQAGRFTAFKEQASSSGHgDFDG---YG---------ASTAGSAIGFAGASLAAS 215 Pseudomonas aeruginosa
Q9I161 169 SGVSRMVPQSYRGVTLKNYHFRALELDAGFVEATRLRNQSGHS-HLTS---GYGngtkggiAADRESPHIAWLGASYSAP 244 Pseudomonas aeruginosa
Q88PP9 152 GGETRMLPQTFRGVSLTNTSIDGLLLEGGQVSFTHPYNQSGHR-RIDT---YYGs-----lDEHDKSKHLNWAGASWSGT 222 Pseudomonas putida KT...
Q9I6X0 153 GGESRMLPQTFRGVSLTNNSFEDLTLTAGQVSFTKYYNQSGHR-RLGS---YYGe-----lPGDRDSHHLSWLGGTWGGI 223 Pseudomonas aeruginosa
Q88J95 193 ASDIRLLPQTLRGFIFNNNSLDGLSLQGGKLESSSDRNASNHRgDLGT---VYA-------GRIKGANDVVYLGGDYRFN 262 Pseudomonas putida KT...
Q88AM0 156 FGDSRLLPESFRGVTAINNSFEGLTLQGGRLHSMSQPVSSNMRdGFVT---FYG--------GAVDSPWVAYFGGDYQAT 224 Pseudomonas syringae ...
2Y0L_A 202 DQLTASYHYSNLQDVYRQHFVGLLHSWPIGpG-ELTSDLRFARSTDSGS----AKAG--GIDNKSLNGMFTYSLGNHAFG 274 Pseudomonas aeruginos...
Q88R66 213 DNFTASLYTADNEDVMKKHYLGLNYVFPIAsDqSLTLDFNGYKSDINNKy--vKAAGlnGDSNTIWSLAATYAYGAHSFT 290 Pseudomonas putida KT...
Q87UB4 207 DEFSAAFYASDNEDVLKKQYVNLNYVFALPqDqSLTFDFNGYKTKLDKDfttsD-----ARDNKIWSLAATWAVGIHSFT 281 Pseudomonas syringae ...
Q9I6U5 232 ERLQLSLYASRFDDIWQQAYFGASHRQPLGgErALRVDLDAYRTRDSGQ----SRFG--RIDTLTSSLALGYEHGPQRIT 305 Pseudomonas aeruginosa
Q9I0E2 216 DNLSGSLFAAQLDNVWRQVYLNMNLQRA-----AFSLDGNLYRTRDQGR----SRAG--AIDTLAYSLQLKYRVGAQGFS 284 Pseudomonas aeruginosa
Q9I161 245 GGSQATLYSGRLEDIWNQHYLGLSQPWRLSsQlTLTPWLHYYKTRDQGR----SQLG--RIDNDLYNAGLTLAGGGQSLS 318 Pseudomonas aeruginosa
Q88PP9 223 EHITANLYAAELKDIWNQYYADFDYTYVVNdLvSLNPGVHFYHTQDTGQ----ALLG--KIDNNTYSVHFTVNAGFHSVT 296 Pseudomonas putida KT...
Q9I6X0 224 EGFTSSLYAAELQNVWKQYYADVDYTYEIDdNwSLNPGAHYYKTVDSGD----SLLG--RIDNNTYSLHFAVGYRQHTVT 297 Pseudomonas aeruginosa
Q88J95 263 DQLTLRLHSSRLDDVWNQSFFSVDHVQPLGsElSLKTGLNYYRTRDSGQ----ALAG--QIDNDSWSVHAGLAAGAHGFK 336 Pseudomonas putida KT...
Q88AM0 225 DRLSLGLYTSRLKDAWDQKYASASYVLPLSdElSLTSSLNYYNATDEGK----KLLG--EFDNDIWSAKVALQYGAHTLS 298 Pseudomonas syringae ...
2Y0L_A 275 AAWQRMNGDDAFPYLEg---------SN-PYL--VNFVQVNDFAGPKERSWQLRYDYDFVGLGIPGLTFMTRYVKGDNVE 342 Pseudomonas aeruginos...
Q88R66 291 LAHQRSTGSTGYNYGFyqnaggvgdgGStIYL--ANSY-WSDFNAEDERSWQLGYGLDFGAYGIPGLTYKLAYVVGDNIN 367 Pseudomonas putida KT...
Q87UB4 282 LAHQRSTGDMGYAYGGyrndggfgdgGNtIYL--ANSY-WSDFNGKDERSWQAAYGVDLSSLVMPGLSYKAAYVRGDNID 358 Pseudomonas syringae ...
Q9I6U5 306 LAYQRVHGEQPFDYMAfgd----grsSAsMVL--ANSVGYSDFNGPGERSWQLRYDLDLGALGLPGLSLHALHARGRAGA 379 Pseudomonas aeruginosa
Q9I0E2 285 LAYQRVHGDTPFDFVG----------GDsIYL--ANSIKYADFNGPGERSWQARYDLDLAPFGLPGLSFMARYVSGRAID 352 Pseudomonas aeruginosa
Q9I161 319 LSLQKVDGDTPFDFIAq---------NDrTFLyeSNAMQYADFNGPGERSWKIQYQASLAFLAAPDWQFGAAYGRGQ-AD 388 Pseudomonas aeruginosa
Q88PP9 297 AAYQRVNGNTPFDYINl---------GDsVYL--DNSRMYSDFNAPNERSWKLQYGYDFAGVGVPGLSTSLSYSRGE-AD 364 Pseudomonas putida KT...
Q9I6X0 298 AVLQKVNGNTPFDYINq---------GDsIFL--DNSQQYSDFNGPNEKSWKLQYDYDFVALGLPGLSASASYSRGK-LD 365 Pseudomonas aeruginosa
Q88J95 337 LSYTRIDGDTPFDYVWn---------TYdLQL--DAASQVSDFNNPNERAWEARYDYDFAPLGVPGLSLTARYVRGTDID 405 Pseudomonas putida KT...
Q88AM0 299 LSHQRNQGDDDFDYLRq---------SDsIYL--ANSIQYSDFNSPKERSWMVTYNLDMSTYGVPGLSFMTRYGKGTDAD 367 Pseudomonas syringae ...
2Y0L_A 343 LAGQs-------------------gEGREWERNTELQYVFQSGALKNLGIRWRNATFRSNF----------TRDIDENRL 393 Pseudomonas aeruginos...
Q88R66 368 TRNVanpq--------------gfgEGKEREIFNQIRYVVQDGPAKDLSIKLRSSFLRTNNavqq---ngyNDDGNEVRV 430 Pseudomonas putida KT...
Q87UB4 359 DGTAgs------------------gDGTEREIFSQLTYVVQSGPAKDLSIRLRNSFLRVSDdaq-----ayNSEGNETRI 415 Pseudomonas syringae ...
Q9I6U5 380 SASSaaesiy---------aglygrDGRHRENDLGFAYRVKAGPLAGLALRASQAWHRGNAsy-------lDGDIDETRL 443 Pseudomonas aeruginosa
Q9I0E2 353 GSHApaggaynplgadgryrplqgsGGKHWERDLDLRYLFASGPFKDLSLNVSHLSHRANAaq-------aGDDIDRLYL 425 Pseudomonas aeruginosa
Q9I161 389 LTRVdpdsagyg-----ylynpngkNAQHWERDLSLRYAFPAGPAKGLSVTLRWATHRPGEgytapgntrgNSSSDEYRV 463 Pseudomonas aeruginosa
Q88PP9 365 LTKAtqdtthyd------yyredgkNAMHWERDLDVKYVFQEGDLKDLSVLVRYATHRGSQgyas---idsNSDNDELRV 435 Pseudomonas putida KT...
Q9I6X0 366 LTRVdpdspgyg-----gwysadgkNAKHWERDLDLQYVVQGGPAKDLSLRLRWATHRGTGgys-----avDNDIDEYRV 435 Pseudomonas aeruginosa
Q88J95 406 GTRAggaysy----------fngteDGRHWERNLWLKYVLQSGPAKDLSFNLMQATHRVGGdh------vaESNVDELRL 469 Pseudomonas putida KT...
Q88AM0 368 YSNAnstymrrd------aqgnpltDQKRWERNIEAKYIVQTGSLKDLSLRVRQANTRATAf---------ESDLDEVRV 432 Pseudomonas syringae ...
2Y0L_A 394 IVSYTLP 400 Pseudomonas aeruginosa PAO1
Q88R66 431 FVEYPIS 437 Pseudomonas putida KT2440
Q87UB4 416 FVDYPIN 422 Pseudomonas syringae pv. tomato
Q9I6U5 444 VVDYSRS 450 Pseudomonas aeruginosa
Q9I0E2 426 IVEYPLK 432 Pseudomonas aeruginosa
Q9I161 464 VVDYPIR 470 Pseudomonas aeruginosa
Q88PP9 436 IVDYPLN 442 Pseudomonas putida KT2440
Q9I6X0 436 IVDYPID 442 Pseudomonas aeruginosa
Q88J95 470 IVQYPLD 476 Pseudomonas putida KT2440
Q88AM0 433 IMEYPLS 439 Pseudomonas syringae pv. tomato
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