4FRX,4FT6,2Y2X,4FMS,4FOZ,3SY9,2Y0L,4FSP,3T24,4FRT


Conserved Protein Domain Family
OprD

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pfam03573: OprD 
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outer membrane porin, OprD family
This family includes outer membrane proteins related to OprD. OprD has been described as a serine type peptidase. However the proposed catalytic residues are not conserved suggesting that many of these proteins are not peptidases.
Statistics
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PSSM-Id: 397572
Aligned: 41 rows
Threshold Bit Score: 417.772
Threshold Setting Gi: 81393930
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4FRX_A   7 AGFIEDSKASLTLRNFYINTDNRNG------TASPSKQE--EWGQGFILNYQSGFTQGTVGFGVDALGLLGVRLDGGGRA 78  Pseudomonas aeruginos...
Q88GR2  23 AAFVEDFKGSLELRNFYYNRDFRND------GATQSKRD--EWAQGFILNLQSGFTEGPVGFGIDAMGLLGVKLDSSPDR 94  Pseudomonas putida KT...
Q88HG8  24 AAFIHDGSGSLELRNFYFDRDFHGD------SATQSRRG--EWAQGFMLRLQSGYTDGVVGFGLDAAGMLGLKLDSSPDR 95  Pseudomonas putida KT...
Q88L77  24 AGFIEDSKLKLQLRNVYFNENFRDEqgmsarAAATAKSErvEWAQGFLLDYQSGFTQGTLGLGVDAMGLLGVRLDSGRGR 103 Pseudomonas putida KT...
Q88EJ7  26 VGFLDDSKASISSRTLYYDGDQRST----------GGADqrQTLTGLRLDFQSGYTEGVVGLGLDLQALAGFTLSGGTSP 95  Pseudomonas putida KT...
2Y0L_A  12 AGFLEDSKASLETRNFYMNRDFRD-------GPGQSKRE--EWAQGFILNLQSGYTQGTVGFGLDAMGMLGVKLDSGRGR 82  Pseudomonas aeruginos...
Q88GG0  32 AGFLEDASAKIEARNVYFNRDFRDGyssssqGA--SKRE--EWAQGFILNVQSGYTQGPVGVGVDALGMFGFKLDSSPAD 107 Pseudomonas putida KT...
Q88MZ9  37 AAFFEDSTATFETRNMYFNRDFRDGt-----SAQQSKRD--EWAQGFILNFESGYTDGTVGFGLDALGMLGIKLDSSPDR 109 Pseudomonas putida KT...
4FSP_A  17 EGFLEDSRASLALRNFYMNRDFRD-------GAGRAKSE--EWAQGFLFDYRSGYTEGTLGVGLDLLGKLGVRLDSGAGR 87  Pseudomonas aeruginos...
Q88HT2  30 ADFIGDSHARLELRNHYINRDFRQS------NAPQAKAE--EWGQGFTAKLESGFTEGPVGFGVDALGQLGIKLDSSRDR 101 Pseudomonas putida KT...
4FRX_A  79 GK-SGLdrqpgtvFPLE-SN-GEPVHDFASLGLTAKAKVSNTEFRYGT-LQPKLPVVTYNDGRLLPVTFEGGQVTSTDLK 154 Pseudomonas aeruginos...
Q88GR2  95 TG-SGL-------LAYD-SD-RQVEDEYGKFVATAKARMGKTELRIGG-VNPLMPLLWSNNSRLLPQVFRGGSLTVNDID 163 Pseudomonas putida KT...
Q88HG8  96 SG-SGL-------LPRG-SD-KRAADDYAKAVATFKARLAQSELKAGG-LSPQLPLLASNSSRLFPQWFNGVQLVSKDLD 164 Pseudomonas putida KT...
Q88L77 104 SG-TGL-------LPVH-DD-GRAADEFASAGITAKARLGSTVVKHGT-LLPKTPVLVYNDARLLPQTYQGTQLTSTDID 172 Pseudomonas putida KT...
Q88EJ7  96 HNaSTVnt----vSPVT-TD-GSPVDNWSRIGGNARFKYSKTELKAGNaLTFNLPVLISNDGRLLPASFQGAALTSNEFE 169 Pseudomonas putida KT...
2Y0L_A  83 SG-TGL-------LPKD-SD-GRAPDTYSKLGLTAKVKVSQSELKVGT-LIPKLPSVQPNNGRIFPQIFEGALLTSKEIK 151 Pseudomonas aeruginos...
Q88GG0 108 SN-SGL-------LPSSgHDpRRSADQYAKMGLAAKVKVSNTVLKYGS-MMPDVPLLKYNDGRLLPTLFHGAMLTSEELH 178 Pseudomonas putida KT...
Q88MZ9 110 TD-SGL-------LPTH-DD-GKAADEYSKLGLTGKVKISQTELKIGT-LIPELPTLQPNDGRILPQTFEGGLLTSKEIK 178 Pseudomonas putida KT...
4FSP_A  88 SG-TGL-------LPLR-DD-GSAAGDYARLDATAKLRLSRSELKVGG-LVPKLPTIQPNYGRLFPQVFQGALLTSGELS 156 Pseudomonas aeruginos...
Q88HT2 102 RN-TGL-------LPFGpNS-HEPVDDYSELGLTGKVRVSKSTLRLGT-LQPILPVVVYNDTRLLASSFQGGLLTSQDLD 171 Pseudomonas putida KT...
4FRX_A 155 DFTLVAGQLEHSKGRNSTDNRSLSIAGAngssASSRDSNKFYYAGGDYKVNKDLTLQYYYGNLDDFYKQHFLGLIHNWQI 234 Pseudomonas aeruginos...
Q88GR2 164 KLTVTATRINAVKQRNSTDFESLTATGY-----APVEADHYNYLAFDFKPAKDMTFSLHAAELEDLYKSYFAGIKVIKPL 238 Pseudomonas putida KT...
Q88HG8 165 RFTFTLLQVDATKLRDSTDYEDLTAMAQqgaySATVTSDRLRYAGVDYQPLNNLTLSLHTSVLEDLFRRDFAGFKFKTRL 244 Pseudomonas putida KT...
Q88L77 173 NLTLTAGHLDRFKQRDSSDSTGLYLDGY-----GGPASGDFSFAGADYAVSKQLRLSYFHGELEHFYRQDFAGLVHDLPL 247 Pseudomonas putida KT...
Q88EJ7 170 NLTLNGGFLNRAIGRASSNWAGISg-------GGAKGSDGFAFAGGDWNVRKNLKLQYYYANLEDYYSQNFLGLIHSFDM 242 Pseudomonas putida KT...
2Y0L_A 152 DLGFTAGRLEKTKIRDSSDSEDLALNDKng-rFAGVSADHFDLGGLDYKLTDQLTASYHYSNLQDVYRQHFVGLLHSWPI 230 Pseudomonas aeruginos...
Q88GG0 179 DLKFTLARLDKYTARDSTDRQDIRVHCKnkryACDTEADHFDLAGVDYRFNERFSAQYQVAKLENIYRQHFLGLVASQPL 258 Pseudomonas putida KT...
Q88MZ9 179 GLTFTGGRIDKAKDRNDTNWEDLALNNKngrfGGTFSADNLALGGLDYQFTDRITGSYHFAQLDDIYRQHFIGMVATQPW 258 Pseudomonas putida KT...
4FSP_A 157 GLSLNLGRLTEVSQRNEAGTSDLALFNRnrrfAGAAQADRFDLAGLDYRIAPDWTGSYHYGELEQVYAQHFLGLKGRIGI 236 Pseudomonas aeruginos...
Q88HT2 172 GLTFNAGRLTKANLRDSSGRDDIGY--------GAASSDHLDFGGGSYAITPQTTVSYYYAKLQDIYRQQFVGLIDTRPL 243 Pseudomonas putida KT...
4FRX_A 235 GpG-VLKTDLRAFDSSSDGKNgsrsgradgyvssgyygsgvTKGEVDNRAFSGLFTYTV-SGHSIGAGYQILNGDSDFPF 312 Pseudomonas aeruginos...
Q88GR2 239 WeG-NVIADVRVFDASETGSK--------------------KLGEVDNRTLSSYFAYSI-KGHTIGGGYQKAWGDTSFAF 296 Pseudomonas putida KT...
Q88HG8 245 GpG-DVFTEWRWFNAREQGRA--------------------LLGGVDNQTLSTNFGYSV-QGHTFSGGYQKVRGDTAYAY 302 Pseudomonas putida KT...
Q88L77 248 GgG-VLTTDLRYFKSRDSGTA--------------------YGGGIDNDMFSGQLSYAH-SGHTVGAGYQVLDGEAGLPY 305 Pseudomonas putida KT...
Q88EJ7 243 GvGqSLTTDLRYFKSDSDGKNgtdsrya-------lrngynENGKIDNTTWSLAFTYKA-GGHALTLGHQQVSDKSGFAT 314 Pseudomonas putida KT...
2Y0L_A 231 GpG-ELTSDLRFARSTDSGSA--------------------KAGGIDNKSLNGMFTYSL-GNHAFGAAWQRMNGDDAFPY 288 Pseudomonas aeruginos...
Q88GG0 259 PvG-SLSADMRLIKSDDIGNA--------------------RAGEIDHRAFSGMLGYSL-GGHKLSAGWQRMYGNSAMPY 316 Pseudomonas putida KT...
Q88MZ9 259 GpG-TLGADLRLAMSDDAGAA--------------------KAGNIDNTTVNGMLSYAL-GGHKVSAAWQQLSGESAFPY 316 Pseudomonas putida KT...
4FSP_A 237 AaD-SLESDLRLALSRDTGGA--------------------RGGRIDNRSFSGSLTYRLrNGQAFGLGYQRMSGDHGFPY 295 Pseudomonas aeruginos...
Q88HT2 244 AeGvSLRSDLRYFDSRNDGAE--------------------RAGNIDNRNFNAMFTLGV-RAHKFTATWQQMSGDSAFPF 302 Pseudomonas putida KT...
4FRX_A 313 LNrgd-----------geGSTAYLITDVQIGKFQRAGERTWQVRYGYDFATVGVPGLTFNTIYLSGDKIKTARG------ 375 Pseudomonas aeruginos...
Q88GR2 297 VNg---------------TD-TYLFGESLVSTFTAPEERVWFARYDFDFAALGVPGLLFTTRYMKGDDVNPDLLtsrqaa 360 Pseudomonas putida KT...
Q88HG8 303 VGg---------------TD-TYLFSEQQVSTFALANERAWMLRYDYNFAAVGIPGLTFNVRYVKGDQVDPQRIasvkgr 366 Pseudomonas putida KT...
Q88L77 306 IS----------------GATVYSFSNVGIGKFIEEEEKTWMASYAYNFAAAGVPGLTFMTRYLSGDNGRSGGE------ 363 Pseudomonas putida KT...
Q88EJ7 315 VNssnvvdgrgrpegeggVQSLYLYTDVMVNSFTRAGENSTFGLYSYDFAALGVPGLKAGWTYVSGKDIRGTGNt----- 389 Pseudomonas putida KT...
2Y0L_A 289 LEg---------------SN-PYLVNFVQVNDFAGPKERSWQLRYDYDFVGLGIPGLTFMTRYVKGDNVELAGQs----- 347 Pseudomonas aeruginos...
Q88GG0 317 LDg---------------SN-PYLVNYAQVNDFAAAQERSWQVRYDYDFKALGVPGLTFFTRYINGDNIKVPGSs----- 375 Pseudomonas putida KT...
Q88MZ9 317 VDg---------------AD-PYLVNFVQINDFAGADERSWQARYDYNFAALGVPGLTFMTRYISGDNVSRAAGg----- 375 Pseudomonas putida KT...
4FSP_A 296 LEg---------------TD-PYLVNFGQYNDFAEAGESSWQLRYDCDFAPLGVPGLSLMTRYFSGHGAKPKGAd----- 354 Pseudomonas aeruginos...
Q88HT2 303 VNg---------------GD-PFTVNLVTYNTFTRAGLDSWQVRYDYDFVAMGIPGLSFMTRYTDGRHAETATVt----- 361 Pseudomonas putida KT...
4FRX_A 376 -------DQS--EWERDISLAYVIPDGTFKGLGFTWKNASFRSGLpaagssnnQRDQDENRLIVSYTLP 435 Pseudomonas aeruginosa PAO1
Q88GR2 361 slrlngeDGK--EWERVTDISYVIQSGPAKGVSFQWRNSTNRSTY--------ADSANENRLIMRYTFN 419 Pseudomonas putida KT2440
Q88HG8 367 alaagdgEGR--EWERTTDITYVVQSGALRNVSLRWRNASMRSNF--------ADAADENRVIVGYTFE 425 Pseudomonas putida KT2440
Q88L77 364 -------GIK--EWERDAEIAYVVQGGPLKGLGVKLRNYVYRSDF--------ARGRDSNRLYLTYDIA 415 Pseudomonas putida KT2440
Q88EJ7 390 ------tTGRynEWESDYRLDYVLQSGTFKGLGFTLRKGVFRTGLpd----stLKDQDQVRFFVNYTYA 448 Pseudomonas putida KT2440
2Y0L_A 348 ------gEGR--EWERNTELQYVFQSGALKNLGIRWRNATFRSNF--------TRDIDENRLIVSYTLP 400 Pseudomonas aeruginosa PAO1
Q88GG0 376 ------vEGK--EWERDTEFKYQVQSGTFKDVSVRLRNSTYRSNYer-----wARDMDETRVIVSYNFS 431 Pseudomonas putida KT2440
Q88MZ9 376 -------EGK--EWERNTELKYVVQSGPLKNVAVRLRNATFRSNF--------ARDADEVRLLVSYSVA 427 Pseudomonas putida KT2440
4FSP_A 355 -------GSR--EWERDSDLRYVLQGGALKGLGLVWRNATYRSAF--------SRDIDENRLYLTYELP 406 Pseudomonas aeruginosa PAO1
Q88HT2 362 -------NGR--ERERDTDITYVIQSGPFKDVSLRWRNVTFRSGNg------lTNAVDENRLIIGYTLA 415 Pseudomonas putida KT2440
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