6CNM


Conserved Protein Domain Family
SK_channel

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pfam03530: SK_channel (This model is not part of the current CDD release)
Calcium-activated SK potassium channel
Statistics
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PSSM-Id: 515644
Aligned: 23 rows
Threshold Bit Score: 93.8238
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6CNM_A        12 LRRRKRLLEQE-KSLAGWALVLAGTGIGLMVLHAE-------------------------MLWFGG----CSWALYLFLV 61  human
8_pfamImport   2 VPEQRMMLVRSqRQHTSFQLFFGGFGVVLMMVQMEylwfintqtlpstcpmesttqcplcFEALGTsvpvSEGRMVLLAL 81 
XP_011418649  44 LARRKELFVKR-KRSSDVALIFALFGILLMVTQTE-------------------------LTAAKVy---HRSSLPSHLM 94 
XP_009030617  10 LGKRKLLTDKR-RFVSNCCLVCALFGIVAMIVETE-------------------------MTMANVy---DKSSKYSCVM 60 
EFO82809     255 YRVRSERLTNR-VRITDRSLYLALFGVILMLVESE-------------------------ITAERIyg-vSKAHWISQSL 307
NP_001256595  11 WKIRRRLSDLK-VKLCDATLILAVGGLILAMLDVE-------------------------FTATRIlesfVNTSDLSFIL 64 
XP_002638621 163 SQNRKKTQLKKcGRVCDISLFLAVLGLILVIIDSE-------------------------LTALSDstgvTKASPISVTL 217
XP_002639529 461 LIRREHLHEKR-RSVSDKALAFAVIGIILMIIENE-------------------------LRTGLLi---RPGSFLSQTL 511
2_pfamImport   2 LIRREYLHEKR-RMVCDKALAFAIMGIILMIIENE-------------------------LRSSNMi---KTESSFSHFL 52 
XP_029695133  51 LRDRKFLLEDK-KRLCALALGTAVLGIVLMIVHAE-------------------------TCPF-Id---KTASHV---F 97  torafugu
6CNM_A        62 KCTISISTFLLLCLIVAFHAKEVQLFMTDNGLRDWRVALTGRQAAQIVLELVVCGLHPAPVrGP 125 human
8_pfamImport  82 RILITFSTALMLYYIYLYYAAECEVMKLKNIVPPKATLMSSSLRRTLLIEMAVLGIHPFPG-IE 144
XP_011418649  95 KMAITASTVALLIFLGIYHRLDIQLFIVNNCVDDWRIPLTARRIIQITFEIIVCSIHPIPGdFD 158
XP_009030617  61 KSLVTISTAILLHLILIYYRLQAQLFIVNNSLGDWRVALSWPVILQATLEIVVCSIHPFPGdIK 124
EFO82809     308 RVGVTCSTIVLLYHIILYHLNDIVLELVDCGADDWRVVVTTERIIQFCIEFICCAICPLPGsGD 371
NP_001256595  65 RTAAIITTIALLFFLLFYHFIDIKIQLVETGTSNWRVGITSERVLNTLLEVAICAICPIPEtGV 128
XP_002638621 218 RSACVVSTFFLICCLVNYHAIEVKIALIDSGADDWRVAFSTDRFVKMLIEVLVCMICPFPGeFE 281
XP_002639529 512 KLSILATTAILLSFVGYFHVIEIQLFMNANAAEDWMVALSFRRIYQICLELFICMLCPIPIeFI 575
2_pfamImport  53 KVCIIGTTTALLTFVGYFHVIEIQLFMNANAADDWMVALTLRRFFQIGLELLICMLCPLPIeLM 116
XP_029695133  98 NCSISLSTACLLVLIIAFHYKDIRLFIIDHNQVDWRIAMTSQRVLVITLELIVCVIHPI-GtYR 160 torafugu
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