Conserved Protein Domain Family
TF_Otx

?
pfam03529: TF_Otx 
Otx1 transcription factor
Statistics
?
PSSM-Id: 397546
Aligned: 17 rows
Threshold Bit Score: 61.0544
Threshold Setting Gi: 426223466
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Q7YRD8       145 PGLSP------LSDPLaamgaSGSSAVCTQRA---PgapVAASSSYALTYAPApAAFSASSSpYGSSSsFFGGLDCSPYL 215 gray short-tail...
CAG01842     248 ASISP------LSDPL-----STSSSSCMQRS-------------YPMTYSQA-PAYNQSY--TGSSS-YFAGMDCGSYL 299 spotted green p...
CAG06432     130 ASISP------LPDPL-----SASTTPCMQRT-----------TTYPMTYTQA-PAYSQSY--AGSSS-YFTGLDCSSYL 183 spotted green p...
Q8JIZ3       154 TSLSP------LPDPL-----CGSGTPCVQRP-----------APYPMSYGQP-SSYSQGY---GSSP-YFSGLDCSPYL 206 zebrafish
XP_003449845 160 A-ISP------LPDPL-----ASSSAPCMQRP-----------SPYPMSYGQP-SAYTQGY--ASTTS-YFTGLDCSAYL 212 Nile tilapia
ELK18595     238 ASESP------LPEA--------------QRAglvAsgpSLTSAPYAMTYAPA-SAFCSSPSaYGSPSsYFSGLD--PYL 294 black flying fox
XP_005987868 154 ASISP------IPDPL-----SASTTPCMQRS-----------TAYPMTYTQA-PGYTQSY--AGSTS-YFSGLDCGSYL 207 coelacanth
Q91994       168 ispgsappsvsLPEPV-----APSNTSCMQRSv-sG----TASSTYPMPYNQT-TGYSQGYP-TPSGS-YFSGVDCGSYL 234 zebrafish
CAG00311     173 pgnapapavapLPEPG-----PPSNASCMQRSm-sGs--AAAATSYPMSYNQT-PGYGQGYP-APSSS-YFGGVDCGSYL 241 spotted green p...
XP_005797531 176 APISPapapanLPDPV-----APTSASCMQRSa-tSs-sNGGAASYPVSYSQTaAAYSQGYPaSASGS-YFSGVECGSYL 247 southern platyfish
Q7YRD8       216 SPMGSQlGGPgSSLSPLPAPGLGPHLGQS 244 gray short-tailed opossum
CAG01842     300 SPMHHQlSAAgSTMSPMANSGMSNHLSSA 328 spotted green pufferfish
CAG06432     184 SPMHSQlSGTgGALSPITASSMGGPLSQS 212 spotted green pufferfish
Q8JIZ3       207 SPMTTQlSASgGALSPLTVPSMGGSLSQS 235 zebrafish
XP_003449845 213 SPMHSQlSGTgGALSPIAVPSMGGSLSQS 241 Nile tilapia
ELK18595     295 SPMVPQlGGP--ALSPLSAPSMGPSLAQS 321 black flying fox
XP_005987868 208 SPMHPQlSAPgSTLSPITNPTMGNHLSQS 236 coelacanth
Q91994       235 APMHSH-HHP-HQLSPMTASSMPTHPHHH 261 zebrafish
CAG00311     242 APMHSH-HHP-HQLSPMTASSMSGHPHHH 268 spotted green pufferfish
XP_005797531 248 APMHSH-HHP-HQLSPMTGSSMTGHPHHH 274 southern platyfish
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap