Conserved Protein Domain Family
FANCA_CTD

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pfam03511: FANCA_CTD (This model is not part of the current CDD release)
Fanconi anaemia group A protein C-terminal domain
This domain is found toward C terminus of human Fanconi anaemia group A protein and related proteins. It contains ARM repeats.
Statistics
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PSSM-Id: 515634
Aligned: 13 rows
Threshold Bit Score: 275.021
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_023350900 1225 IAAASVHFAVHQQGdLETTKKSLKKLGCEGEELLVSLFFFSLMGLLSSYLAPN-------ERMNSQKSLDICAEVLGCLE 1297
6_pfamImport    1 LSAAFLHGAILQQSpRGRGTEALERLGTDAEQLLVALLFFSLLDLISARIAPK-------EGVDFQASLEWSQQILQCLE 73  
8_pfamImport    1 ISAAFLHCTIQQQSpHGRERNVLKRLGTDTEQLLVSLLFFSLMDLISAKIAPK-------EGVDFQTSLEWSLEILQCLE 73  
3_pfamImport    1 VSAAALHFVIQQAG-KESVESALEKLDCQREELLVCLFFFSLMGLLSSHLTPHirqtssaKAGDSLKALHVCGEILGFLQ 79  
XP_005653286 1241 LCAAALHLELRQAG-KAGLRSELARLPCPGDELLLFLFFFSLMGLLASHVTPH--------AAGSPEALAVCTEILGCLQ 1311
NP_001193532 1210 LCAAALHFAIQRAR-KESFRQELGKLDGQGEELFVSLFFFSLMGLLSSYLTPQ--------AIGSLRALDICADILGCLQ 1280
4_pfamImport    1 VSAAALHFAIQQAG-KGSLRRGLERLCCPTEELLVVLFFFSLMGLLSTYLTPH--------AGSCLTALDICAEILGCLE 71  
1_pfamImport    1 VSAAALHVALTQAG-KDDAGTRLKQLGGEREEVRPSLSIFSP--------GPQ-------GTADPRKALHVCAEILLCLE 64  
Q9JL70       1217 IAAAALHFAWRGVR-KEDVTAHLQRLDCQREELLIALFFFSLMGLLSSYLTQR-------DTAEHLKAVDICAEVLTCLE 1288 house mouse
XP_040134902 1137 VSAAALHFAVKKVK---TEGARWPKLDCEREELLVPLFFFSLMDLLSSHLTPN-------DTVDPPKAVDTCAEVLECLQ 1206
5_pfamImport    1 ISAAALHFAIQGLR-REDVRRQLQRLDSVSEELLVFLFFFSLMGLLSSHLSPN-------DAGDSLKALGVCAEVLECLE 72  
NP_001273096 1225 LSAAALHFAIQQVR-EENIRKQLKKLDCEREELLVFLFFFSLMGLLSSHLTSN-------STTDLPKAFHVCAAILECLE 1296 human
XP_014345829  125 ISAAFTYFTFQRQTeHRSIGVALKGMESNTEQLL-SLFFFTLVDLISATLQPK-------EKLESSRKLEVCVEVIRTLE 196  coelacanth
XP_023350900 1298 KRKL-SWLVLFQLTKKEnasNGRYQILLHLASDQYLRLLPFAFYSLVAYFDDDLF---NREQAFPYVAVDMYLKLVQLFV 1373
6_pfamImport   74 GRGT-SWPHLFHSAEGD---PGKCRVLRSAASQRHTRLLPLAFYSLTPSFQPELL---QREPAFLSVALQMYIQLLQLFV 146 
8_pfamImport   74 ERGA-SWPLLFQSAEKG---SRKYFVLHSAASACHSRLLPLAFYSLTPAFDHELL---AREQLFLYVALDLYLQLLQLFV 146 
3_pfamImport   80 KRKI-SWLVLFQLTETD---AGLGRVLLRLAPEEHIRLLPFAFYSLLSYFDKDAL---IRENAFLHVAVDMYMKLTCLFV 152 
XP_005653286 1312 RRRV-SWLPLFQLTEAG---AGLGHTLLRLAPDHLLRLLPVAFYSLLSSFEEDAP---LQQEAFLHVAVDMYLQLVRLFM 1384
NP_001193532 1281 RRRI-SWLLVFQLTEAD---VPLGRTLLGLAPDHQVRLLPVAFYSLLPYFDEDAL---LTEDAFLHVALNMYLKLVGLFV 1353
4_pfamImport   72 KRKV-PWLPLFRLTETD---AGLGHLLLLLAPDQHVRLLPVAFYSLLSYFDEDAL---IQDDAFLHIAVDMYLKLLCLFV 144 
1_pfamImport   65 QRGI-PWLGLFQLTEAD---AGLGRLLLRVAPDRHTRLLPFAFYSLLPYWRDATA---VREAAFLRVAVDMYLKLRQLFV 137 
Q9JL70       1289 RRKV-SWLVLFQLTEKD---AKLGH-LLHLAPDQHTRLLPLAFYSLLSCFSEGAA---VREAAFLHVAVDMYLKLLQLFV 1360 house mouse
XP_040134902 1207 RRRV-DWLVLFQLTETD---AGLGHLLLRLAPDQHTKLLPLAFYSLLSHFKDDAI---IREEAFLRVAVDMYFKLVQLFM 1279
5_pfamImport   73 KRKI-SWVALFQLTETD---AGLGHLLLRVVPGQHARLLPVAFYSLLSYFQDGAA---IREEVFLHVAVDMYLKLLQLFM 145 
NP_001273096 1297 KRKI-SWLALFQLTESD---LRLGRLLLRVAPDQHTRLLPFAFYSLLSYFHEDAA---IREEAFLHVAVDMYLKLVQLFV 1369 human
XP_014345829  197 GKGVsSWLTLFLSGESE---HSLHAILYRTTSDLHTRLLPLAFCSVVPTFDQRLLssvVRRQEFLFVAVMMYTALVRLFL 273  coelacanth
XP_023350900 1374 AGETSVISAKAHLSpkh-----giqVDPFGLITKARLFLLHSLPQCPRRSFSSLMELLATCEKFDPE 1435
6_pfamImport  147 EGEVLPQSDQDPTK-----------HDPLELISAARQFLLGAIPHCPAQSLGNTQPLLSACEELDPE 202 
8_pfamImport  147 EGKDLPQSDQVGQGqdp-----vehGDPVEVISKARRFLRAAIPRCPARSFGNLGPLLAACDQLDPE 208 
3_pfamImport  153 AGETSAVSTPANRSqel-----qsqGDPVGLIRKARLFLLQSIPQCPKKSFSNMEELLATSGDWDPE 214 
XP_005653286 1385 DGGTSAVSTRAHSGelr------gqGDPVSLITKARLFLLQLIPRCPARSFACVTELLAAPGACDPE 1445
NP_001193532 1354 AGETGAIWTVAHDGelp------tqGDPVSLITNARLFLLQLIPRCPERSFLHVAELLAESGDCDPE 1414
4_pfamImport  145 AGETAVLSTLASRTqel-----qgqGCPVGLITKARLFLLQSIPRCSRKSFSNMAELLATHGDCDPE 206 
1_pfamImport  138 DGETSAVVTPASGSrel-----qeqGSPVELVTKARDFLLQLIPQCPRKSCSDVAELLAGRGDWDPE 199 
Q9JL70       1361 DGETRLQGHSESQ------------GSPVQLITKARVFLLQLIPQCPKQCFSNMTELLAGRGDCDPE 1415 house mouse
XP_040134902 1280 DGETRAVSAPASRRlelqgqsspqpGNPVQLITEARLFLLQLIPQCLKSGSSNMAELLAGREDWDPG 1346
5_pfamImport  146 AGDTSAVSTLVSRSpel-----qgqGNPVELITKARLFLLHLIPQCPNKSFSNMTELLADHKDCDPE 207 
NP_001273096 1370 AGDTSTVSPPAGRSlelk----gqaGQPRGTDNKSSSFSAAVNTSVPEKEL-----LTRGRAag--- 1424 human
XP_014345829  274 EGENSSFSHFREQQqsh-----eqtGT-LDVITRAQQFLLHIIPQCPLESFSCVRQLQDSCGDLDPE 334  coelacanth
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