3RFI,1SN6,3BQQ,5W7D,5W7A,1OF9,2GTG,5NXB,3BQP


Conserved Protein Domain Family
SapB_2

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pfam03489: SapB_2 (This model is not part of the current CDD release)
Saposin-like type B, region 2
Saposin B is a small non-enzymatic glycoprotein required for the breakdown of cerebroside sulphates (sulphatides) in lysosomes. Saposin B contains three intramolecular disulphide bridges, exists as a dimer and is remarkably heat, protease and pH stable. The crystal structure of human saposin B reveals an unusual shell-like dimer consisting of a monolayer of alpha-helices enclosing a large hydrophobic cavity. It is one of the most studied members of the saposin protein family and it is involved in the hydrolyzis of glycolipids and glycerolipids. SapB is unique in the saposin family in that it facilitates degradation by interacting with the substrate, not the enzymes.
Statistics
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PSSM-Id: 515621
Aligned: 431 rows
Threshold Bit Score: 28.6386
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3RFI_A                10 ECKTIVSQYGEMIWDLLVSGVR-PDQVCSQAGLC 42   potato
36_pfamImport          2 ECLTVVDQFYHIIYSILKSKLD-ADSVCSFINVC 34  
WGS:AAPU:GI18636-PB  113 ECKLLVDEYSHTLYSLLNSSMN-DESICRMVGLC 145 
37_pfamImport          2 TCANIVSNYFDDFYELAKQHLQ-SNDICQVVSMC 34  
XP_002001151         237 GCANLVLTYFNDIYENLQQHLQ-SDGLCHLSGVC 269 
XP_001995942         240 ACASLVLTYFNDLYEHLEQHLQ-TNGLCHLSGVC 272 
Q8IMH4               150 ACANIVLTYFNDIYDHVSKHLT-TDAVCHVSGVC 182  fruit fly
193_pfamImport         2 ACSSIVLTYFSELYEHLNIHLT-PDAICHLSGVC 34  
XP_046456728         328 ECQALVEQYGDVAYSFVLKE-LdPHEACRMLTLC 360  common water flea
XP_029838392         323 ECQKLLDEYFDMAYSYLLEA-LtPDEFCAAIGLC 355  black-legged tick
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