2H6L,3HTN,2P6Y


Conserved Protein Domain Family
PCC

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pfam03479: PCC (This model is not part of the current CDD release)
Plants and Prokaryotes Conserved (PCC) domain
This is a Plants and Prokaryotes Conserved (PPC) domain found in proteins that contain AT-hook motifs pfam02178 which strongly suggests a DNA-binding function for the proteins as a whole. Proteins with PPC domains are found in Bacteria, Archaea and the plant kingdom. The PPC domain has a single alpha-helix packed against an antiparallel beta-sheet, which is formed by five beta-strands. There are three highly conserved histidine residues,which appear to form a zinc-binding site, and the domain has been observed to form homotrimers. The domain co-occurs with a thioredoxin-like domain in uncharacterized cyanobacterial proteins.
Statistics
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PSSM-Id: 515613
Aligned: 297 rows
Threshold Bit Score: 52.931
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2H6L_A           12 FLLRLDYGKDLVRQIEEFLEEKgIHAAHISAIGAVRSAVigyydqekkeyvkkelxEPLEILSLSGNVSXkD-SkpfchI 90  Archaeoglobu...
EGJ70650         11 FIVSLKNGTEIVKALQHFCKEMnIRSGIIAGIGSIDEIRlrffnaktkqyssqqfqEQMEIANLMGNIST-YnKdiylhI 89 
Q8A8Q1           54 YIVSINNHTEIVKALNAFCKEKgILSGSINGIGAIGELTlrffnpktkayddktfrEQMEISNLTGNISS-MnEqvylhL 132 Bacteroides ...
WP_012546500     11 FQGRLFKGEEIISGLNKFLKENsIKAGLVNGIGAVTRVKigyydqsekkyishdfnEPMEILSLKGNISL-KdGeafphI 89  Thermodesulf...
jgi:Flexsi_1466  11 YQGRLKKDEDLYYGLMNEIKNLnIHEGFIAGIGSVTKASiafynqkegtyenthvnEPMEIVSLKGNISL-KdDkpfahI 89 
WP_013008260     10 YRTRLKKDDDLYFAIMREINKLeINSGIVIGIGAVQKANiayfnqnkkvyenfhfnEPMEIVSLKGNISI-KdDkpfghF 88  Deferribacte...
Q5JF66            9 FLFRVPAGEDLLEAINRSAESRgIKTGVVMGIGSLRNPVvgyyseeekryrsielsGTFELLSLNGNISL-KdGkpfahL 87  Thermococcus...
WP_012309866     10 HLLRVDQGKEVLSEILRVCDENnIKAAIIIGLGLLSRSKiaffdietqsyrymnveEPMELASLVGNVSL-KeGkpfahV 88  Candidatus K...
2_pfamImport      3 WVIVLEKGEKITESIKKFCSETgIKAGIVNAIGAAKDIKigyfdintkeynetnfsDYYEITSLTGNIST-KdGqpythI 81 
3HTN_A           18 YIVSINNHTEIVKALNAFCKEKgILSGSINGIGAIGELTlrffnpktkayddktfrEQXEISNLTGNISSxN-EqvylhL 96  Bacteroides ...
2H6L_A           91 HVLLGKd-GEVYGGHLFsAEV--FACEVFVLPLS 121 Archaeoglobus fulgidus
EGJ70650         90 HITLGRsdYSAIAGHLLsATIs-GTGEFLVEDFD 122
Q8A8Q1          133 HITVGRsdYSALAGHLLsAIQn-GAGEFVVEDYS 165 Bacteroides thetaiotaomicron
WP_012546500     90 HIVLSKkdFSCIGGHLYeAEV--FAFEFEIIEFE 121 Thermodesulfovibrio
jgi:Flexsi_1466  90 HITLAKrdFTVIGGHLLpDTPv-FAFEYEIFSYA 122
WP_013008260     89 HISLGRsdFTVVGGHLLpDTIi-YACEIDIIEFE 121 Deferribacter desulfuricans
Q5JF66           88 HVTLGDeeGRVFGGHLIrGEV--FVAEVYIEELI 119 Thermococcus kodakarensis KOD1
WP_012309866     89 HVVLGDg-RRALAGHLVeGYVg-GTVEITIFELE 120 Candidatus Korarchaeum cryptofilum
2_pfamImport     82 HINFTGadCVGYGGHFIeGTIt-VTCEMFITEID 114
3HTN_A           97 HITVGRsdYSALAGHLLsA-IqnGAGEFVVedys 129 Bacteroides thetaiotaomicron VPI-5482
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