3FZV,1I69,3JV9,4X6G,2FYI,5Z49,2ESN,2HXR,3T1B,3HHF,3GLB


Conserved Protein Domain Family
LysR_substrate

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pfam03466: LysR_substrate 
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LysR substrate binding domain
The structure of this domain is known and is similar to the periplasmic binding proteins.
Statistics
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PSSM-Id: 397504
Aligned: 299 rows
Threshold Bit Score: 59.2374
Threshold Setting Gi: 81857313
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3FZV_B  90 NDVIAGQIDIGCfETvAPLYLPGLIAGFRQAYPgVEIRIRDGEQQELVQGLTSGRFDLAFLYEHD-LDSTIETEPLXpPQ 168 Pseudomonas aeruginos...
Q9CEG5  87 NAELSGHLTIGAlEGwTTSSIAKTLQRLTNKYPsITLTILSGNADDIKWKIDNGLVDVGFLLEPT-STEKYNVEKIGfPE 165 Lactococcus lactis su...
P0A2Q2  86 gpSLSGELHIFCsVTaAYSHLPPILDRFRAEHPsVEIKLTTGDAADAMEKVVTGEADLAIAGKPE-TLPGAVAFSML-EN 163 Salmonella enterica s...
Q9CLF2  87 QQELNGELKLFCsVTaAYSHLPAILERFRTRYPkVEIQLTTGDPSLALQLVETQQVDLALAGQPKnLPNHIAFHYID-DI 165 Pasteurella multocida
Q9KVI5  86 SQELRGEIKLFCsVTaSYSHLPELLSSFRLKHPyIEFKLLTGDPAQAIDKILHDEADIAISAMPEqLPSRIEFATIS-EI 164 Vibrio cholerae
Q9KBY7  86 KGSVSGRLSLGIsSVvSHYLIPPLLEKYTKAYPrVNIELISTTSDQIRR-TFSS-YHVAIFRGDR-LPEQ-ASHLLL-AD 160 Bacillus halodurans
Q2G0C6  86 iGEVNGTISIGCsSLiGQTLLPEVLSLYNAQFPnVEIQVQVGSTEQIKA--NHRDYHVMITRGNK-VMNL-ANTHLF-ND 160 Staphylococcus aureus...
O34827  86 EGEIHGTLKLAVaSIiGQHWLPKVLKTYVEKYPnAKISLITGWSSEMLKSLYEDQVHIGIIRGNP-EWKG-RKDYLM-TD 162 Bacillus subtilis sub...
O07906  86 SKEVQGHLRLGVsSNfAQYKLPKLLREFSTMYPnVQYSVQTGWSTDVMKLLDAGIVQVGILRGSH-RWKG-VEERLT-RE 162 Bacillus subtilis sub...
Q9K610  86 SEEVSGSIRVGVsNFfALNKMPKLLRLFKQTYPnVEFQVVTGWSSEMHRLILNHDVHIAFIKGDY-LWNE-TKHLLY-EE 162 Bacillus halodurans
3FZV_B 169 RPHALLPEGh----RFAG--QAQVSLRDLcl--ePXILLD-VQP--SRTYFVSLFEEL-GLTP-NIAFSSPSIEXVRGXV 235 Pseudomonas aeruginos...
Q9CEG5 166 RWMMLTQSDs----ELAE--LDEVSPEIFkk--qRILI---SERpeVRQFIADWAGCQ-VSDL-EIIGGFNLGFHLFEIA 232 Lactococcus lactis su...
P0A2Q2 164 LAVVLIAPAl----PCPVrnQVSVDKPDWst--vPFIMAD-QGP--VRRRIELWFRRH-KISNpQIYATVGGHEAMVSMV 233 Salmonella enterica s...
Q9CLF2 166 SLSLIAPRIacsatQLLQ--QTPINWQQI-----PFIL-PvEGP--ARQRIDQWFKQQ-KIKHpKIYATVAGHEAIMPMV 234 Pasteurella multocida
Q9KVI5 165 PLSVIAPLGissfmDELQ--KEQPDWNEI-----PFIVPE-SGT--ARDRANTWFKQM-KIKP-NIYAQIAGHEAIVSLV 232 Vibrio cholerae
Q9KBY7 161 PLYLVFDKDi----PIEK--R-------------PLIQWKsDPS--LEALIQAWMRSVtSFTF-RGHVSVDQIETCKQLM 218 Bacillus halodurans
Q2G0C6 161 DHYFIFPKN---------------RRDDVtk--lPFIEFQaDPI--YINQIKEWYNDNlEQDY-HATITVDQVATCKEML 220 Staphylococcus aureus...
O34827 163 HLYLVDTEIs--------------CIEDIahterPFIQFKsDST--YFQEIQHWWHQKfKTSP-KQTILVDQIETCKQMA 225 Bacillus subtilis sub...
O07906 163 KLHII-SKK-------------PITIEQLpf--lPFIKYKtDAS--LKTIIEDWMHTNlKQAP-IIAMEVDRQETCKEMV 223 Bacillus subtilis sub...
Q9K610 163 EICIAAPWEf--------------TWEDLpt--lPRIDYHtDEK--MRSIVDQWWYNQyKQKP-NVTIQVNQVETCKEMV 223 Bacillus halodurans
3FZV_B 236 GQGFGFSLLVTRPHSECTy-DGKKVVXVDLAEP---VST-SGLAAAWLKRAqLTKPARLFVDYCREQLG 299 Pseudomonas aeruginosa PAO1
Q9CEG5 233 RAGIGEAVVTEGALIRDY--PD--LKAIPLSP----EVK-TLSVLAWKKNIpLTPLTRAFIKQYLQDNE 292 Lactococcus lactis subsp. lactis
P0A2Q2 234 ALGCGVALLPEVVLENSPepVRNRVMILERSDE---KTP-FELGVCAQKKRlHEPLIDAFWKILpn--- 295 Salmonella enterica subsp. enter...
Q9CLF2 235 ALGCGVAMLPDVVIKNSP--MNSQVSILHLKT----PITpFALGICVQKKSlTQPLVRAFWQIL----Q 293 Pasteurella multocida
Q9KVI5 233 ALGCGVGIAPDVVINNSP--VRDKIQ-RLSVT----PIKpFMLGVCCKRSQlDNPLVQALWRVVSAKKS 294 Vibrio cholerae
Q9KBY7 219 LRGVGAAILPEMAIKDVS--DQCFHK-LPLQLDn-qPLE-RQTWVLYEEEAlSLPQVEAFLQLL----P 278 Bacillus halodurans
Q2G0C6 221 ISGVGVTILPEIMMKNISk-EQFEFEKVEIDNE---PLI-RSTFMSYDPSMlQLPQVDSFVNLMAsfve 284 Staphylococcus aureus subsp. aur...
O34827 226 LHGIGYAILPSVTLQNED--KVNKMPLLDMKGH---PIG-RDTWLLGYEPAfELKQVQAFVQVIKDMLD 288 Bacillus subtilis subsp. subtili...
O07906 224 KHGLGYSIAPEICLQE-----SDHLYTMELYNAkgkPLM-RDTWLMYDQKSlGIKLVKAFIDFLKGEQM 286 Bacillus subtilis subsp. subtili...
Q9K610 224 IHGLGYAIIANLVVRP-----YPELIIKPLHHPsgkPIT-RKTWMYYHNDMlQLNIVKAFVQFIQSIDV 286 Bacillus halodurans
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