4V4R,4V9N,8OIP


Conserved Protein Domain Family
PCRF

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pfam03462: PCRF (This model is not part of the current CDD release)
PCRF domain
This domain is found in peptide chain release factors.
Statistics
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PSSM-Id: 515598
Aligned: 770 rows
Threshold Bit Score: 152.557
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4V4R_AY        21 DPEVLKDKGRyqSLSRRYAEMGEVIGLIREYRKVLEDLEQaesLLddpELKEMA--KA-----------E----REALLA 83  Thermus thermo...
WP_013872611   41 DPQLWSDQDRaqAVTRRLSSVRGDISRVEALRRRLDDVIA---AL---DLGddd------------llaEaandLPTLAR 102 Protofrankia
WP_013154729   42 DPELWADQDNaqKVTRQLSSLESMVNKINGIGQRLDDLGV---LY---ELAEAedda--------dtrvEadreLDQLRK 107 Nocardiopsis
WP_013138657   41 DPSLWEDQERgqEVTSGLARKQATLRAVTGLRSRLDDLHV---LY---ELAEDeegaqg-----qealeEadteRKTLRA 109 Segniliparus r...
Q4JX47         41 DPSLWDDPDHaqQVTSELSRVQSKLKKVKGLRQRLDDLPV---LY---DMAEEe--AGddpdaaqeavqLadteREELRQ 112 Corynebacteriu...
C3PES4         41 DPSLWDDPDHaqKVTSELSAQQAKLRKLNSLRGRIEDLPV---MS---ELAEEegde--------asqeLveteLKELGA 106 Corynebacteriu...
WP_012732067   41 DPSLWDDPDHaqQVTSKLSHVQAQIKKVTTLRQRVDDMPV---MY---ELADDAteAGdtdaa-deareMadseRETLRH 113 Corynebacteriu...
WP_013127627   41 DPELWNDQANaqQVTSQLSHAQSELRRVTDLRQRLDDLPV---LY---ELAEAeegddl-----aaaleDadadRAKLRG 109 Tsukamurella p...
WP_013110611   41 APDFWDHQEKaqALVTELRNVNGSLKPLQELIDGTEELAV---LR---EFL-----AEddss---esrdEmvglLASLQE 106 Planctopirus l...
jgi:Psta_0251  63 QPDFWNVQEKalEVVSQVKSLKAILAPLDAIVNSASDLPG---ML---DMA-----GDdes-----faaDlraeIERIEK 126
4V4R_AY        84 RKEALekELERHLLpkDPMDERDAIVEIRAGTGGEEAALFARDLFNMYLRFAEEMGFETEVLDSHP-TDLgGFSKVVFEV 162 Thermus thermo...
WP_013872611  103 DISAL--EVRTLLS--GEYDERDAIVQLSAGAGGVDAADWTAMLLRMYLRWAERHGYAAEVFDTSEaEEA-GLKSATFQI 177 Protofrankia
WP_013154729  108 EIGEL--EVRTLLN--GPHDEREAIVTINSQAGGVDAADWAQMLQRMYLRWAERHGYPTDVYETSYaEEA-GIKSTSFAV 182 Nocardiopsis
WP_013138657  110 EIESL--EVRTLLN--GEYDEREALVTIRSGAGGIDAADWAQMLMRMYIRWAERHKHPVEVYDISYaEEA-GIKSATFAV 184 Segniliparus r...
Q4JX47        113 EIESL--EVTTMLS--GEYDEREAVLNIRSAAGGVDAADWAEMLLRMYTRWAEKAGHKVEVYDISYaEEA-GIKSATIVI 187 Corynebacteriu...
C3PES4        107 AIESL--EVTTMLS--GEYDEREAVINIRSGAGGVDAADWAEMLMRMYTRWAEKNGHKVDVYDISYaEEA-GIKSATFVV 181 Corynebacteriu...
WP_012732067  114 EIESL--EVQTMLS--GEYDEREAVVNIRSAAGGVDAADWAEMLMRMYTRWTEQHGHKIDVFDISYaEEA-GIKSATFIV 188 Corynebacteriu...
WP_013127627  110 EIEAM--EVKTMLS--GEYDARDALVNIRAGAGGVDAADWAEMLMRMYIRWAEKHGYGVEVYDTSYaEEA-GLKSATFAI 184 Tsukamurella p...
WP_013110611  107 KFQQV--ELKAMMS--RPEDPCSAYLQIQAGEGGTDASDWAAMLLRMYTRWAEDRGFETELIEISEaEEA-GIRNATLAI 181 Planctopirus l...
jgi:Psta_0251 127 QLDDL--ELKALLN--GPLDNVGAIVTIHARDGGTDASDWAEMLLRMYIGWAQKNGYEYKVTERDEaDVA-GISAATLVI 201
4V4R_AY       163 RGPGAYGTFKYESGVHRVQRVPVTETQGRIHTSTATV 199 Thermus thermophilus HB8
WP_013872611  178 KAPYAYGTLRSEHGVHRLVRISPFDNQNRRQTSFAGV 214 Protofrankia
WP_013154729  183 KTPFAYGTLRGEHGTHRLVRISPFDNQNRRQTSFAGV 219 Nocardiopsis
WP_013138657  185 KSAYAYGTLSVEQGTHRLVRISPFDNQGRRQTSFADV 221 Segniliparus rotundus
Q4JX47        188 HGEYMYGTLSVEQGTHRLVRISPFDNQGRRQTSFAEV 224 Corynebacterium jeikeium K411
C3PES4        182 HGEYMYGQLSVEQGAHRLVRISPFDNQGRRQTSFAEV 218 Corynebacterium aurimucosum ATCC 700975
WP_012732067  189 HGDYMYGQLSVEQGTHRLVRISPFDNQGRRQTSFAEV 225 Corynebacterium kroppenstedtii
WP_013127627  185 KTDYAYGTLSVEMGTHRLVRISPFDNQGRRQTSFAEV 221 Tsukamurella paurometabola
WP_013110611  182 RGEYVYGLLRGETGVHRLIRISPFDGAGRRQTSFAAV 218 Planctopirus limnophila
jgi:Psta_0251 202 RGPMAYGYLKGESGHHRLVRISPFNSEGKRQTSFAAV 238
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