Conserved Protein Domain Family
HA

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pfam03457: HA 
Helicase associated domain
This short domain is found in multiple copies in bacterial helicase proteins. The domain is predicted to contain 3 alpha helices. The function of this domain may be to bind nucleic acid.
Statistics
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PSSM-Id: 427308
Aligned: 236 rows
Threshold Bit Score: 33.357
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EED92077      188 ERVFLARLEELREFKGK-YG---HTLVP-------------EKYEENSALGAWVSNLRSLY--KRRRrsesmlergdtfk 248 
Q824Z0        763 ADKWAMNYEAAKQFYER-EG---HLQVPrkhie---rtvgeDQEEREHKLGAWIGNQRSRA--AT--------------- 818  Streptomyces ...
Q8R6K2        778 KQSFQRGLAALAQWVER-EG---ADR-PvprghaeeiavdgEADPVIIKLGVWVSNTRARR--DK--------------- 835  Streptomyces ...
WP_086016564  817 EQAFQRGLAALTQWVER-EG---ANR-AvprghgeqitvdgETEPTLVKLGVWTSNTRARW--DK--------------- 874  Streptomyces ...
AGS66848      785 QQAFQRGLAALTEWVER-EG---AHR-PvprstiveitidgEPEPVPVRLGVWITNTRQRR--HK--------------- 842  Streptomyces ...
EDY63986      489 AEKWAMHLAAARQFFER-EG---HLKVPrkhter--iilgkDQEQRELRLGAWISNQRSRA--TT--------------- 545 
XP_001417150  180 ADPWPRKWALVLKWGEErANg-eHFNVPy------------DYKDGDERVGVWLNTQRQRF--RGGTtkn---------- 234  Ostreococcus ...
XP_001417150  260 DDVWEKKFALLLRWGKE-KTrgvNYNVPq------------GEEYEGVNLGSWLSTQRARLlhETLGkn----------- 315  Ostreococcus ...
EST18055      648 PADWQRHYAALAELVGEeEGqad--vlP-------------GVTVHGMDVGKWLDRQRQPA--VWQG------------- 697 
WP_020945107  700 AVDWQRTYTAVAGLVATgAGlee--ivP-------------GVTADGIDVGRWLQRQRQQV--IWQG------------- 749  Streptomyces ...
EED92077      249 vvdtsddstirrekrsmnilqhshspkrrkrkrsprfshLDDEKEALLEGLGF 301 
Q824Z0        819 ---------------------------------------LTPERMEKLSAIGM 832  Streptomyces avermitilis
Q8R6K2        836 ---------------------------------------LTAEQLNALRGLGM 849  Streptomyces coelicolor
WP_086016564  875 ---------------------------------------LTAEQQAALAALGV 888  Streptomyces davaonensis
AGS66848      843 ---------------------------------------LDAEQLHALRELGM 856  Streptomyces collinus Tu 365
EDY63986      546 ---------------------------------------LSPERVEQLSAIGM 559 
XP_001417150  235 -------------------------------------lpLTPWQTEQMQAMid 250  Ostreococcus lucimarinus CCE9901
XP_001417150  316 -------------------------------------rpLSDDERRKLQKLid 331  Ostreococcus lucimarinus CCE9901
EST18055      698 ---------------------------------------LVEKQRELLTEIRv 711 
WP_020945107  750 ---------------------------------------LKPGQRERLGSLDV 763  Streptomyces collinus
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