Conserved Protein Domain Family
HrcA_DNA-bdg

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pfam03444: HrcA_DNA-bdg (This model is not part of the current CDD release)
Winged helix-turn-helix transcription repressor, HrcA DNA-binding
This domain is always found with a pair of CBS domains pfam00571.
Statistics
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PSSM-Id: 515581
Aligned: 13 rows
Threshold Bit Score: 128.218
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
O30125         5 DLTQIQKDILYALITLYKKKsGGSVKGEEIAELINRNPGTVRNQMQALRALGLVEGVPGPKGGYRPTSKAYELLSVTRPE 84  Archaeoglobus f...
Q8ZTC8         3 SLSDSVYNVLKALVELYNKE-GAPVKSRDIANVLKIHEGYVRNMLSILKSMGLVISKAGPHGGYIPTSKATDILSRQTFS 81  Pyrobaculum aer...
Q9YDD9        35 MLTSLQREVLETLVSLYERH-KRMIKSKEVAEALGKDEGTVRNVIMWLKSLGLVESRTGPAGGYMPTLKAYEVIGVQTPT 113 Aeropyrum pernix
Q4J8Q8         3 NLSSTQREILLALIDIYNKN-KRMVKSKEIADMIGKDEGTVRNVILSLKVLGLIESKPGPSGGYVPTLKAYEAIKNPVIT 81  Sulfolobus acid...
Q8TQZ4         2 ELTPIQKDIIIALINLQRQK-DRAIKGEEIAEVIQRNPGTVRNQMQLLKALGLVEGVPGPKGGYKPTGAAYDALRIQQLk 80  Methanosarcina ...
WP_011323464   5 ELTPSQKTILQELINLYRES-ESAVKGEDIAEKVDRNPGTIRNQMQSLKALQLVEGVPGPKGGYKPTATAYDALKIQEME 83  Natronomonas ph...
Q9HR28         5 ELTASQKTVLRALVDRYTQQ-ETAVKGEAIADEVDRNPGTIRNQMQSLKALQLVEGVPGPKGGYKPTVDAYEALDIQQLD 83  Halobacterium s...
Q2FS71         2 DLSPIQNDILITLISLYEKK-SLPIKGEEIADIILRNPGTVRNQMQALKAIGLVDGIPGPKGGYHPTSLAYKELHLKHDG 80  Methanospirillu...
Q58629         2 ELTVVQREILQELINLYREK-NRPIKGTEIALRLNRNPGTIRNQMQALRALDLVDGVPGPKGGYVPTSKAYRALGLEDEG 80  Methanocaldococ...
Q6M165         2 ELTIVQKEILQELISIYREK-NKAVKGTEIAVKLSRNPGTIRNQMQALRALNLVDGVPGPKGGYIPTSLTYRSLGLETEE 80  Methanococcus m...
O26229        10 MLTSVQKEILQTLINLYRNSnGKSIKGEEIAAIMNRNPGTIRNQMQSLRSLGLVKGVPGPRGGYKPTIKAYHQLNISSTG 89  Methanothermoba...
Q2NHA8         1 MLTAVQREILQSLINLYRKSkCTSVKCESIADLMGRNSGTIRNQMQSLRSLGLVQGVPGPRGGYKPTLEAYHTLNIENDP 80  Methanosphaera ...
WP_229571061   3 NLSPTQREILLALTDLYNRQ-KRMIKSKEVADVIGKDEGTVRNIILSLKVLGLVESKPGPNGGYMPTLKAYEIINNPTLt 81  Saccharolobus
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