2D1I,2P82


Conserved Protein Domain Family
Peptidase_C54

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pfam03416: Peptidase_C54 (This model is not part of the current CDD release)
Peptidase C54 catalytic domain
This is the catalytic domain of of cysteine peptidases from C54 family, which includes cysteine protease ATG4 from human and its homologues from fungi and plants. ATG4 plays a key role in cytoplasm to vacuole transport (Cvt) and autophagy by mediating both proteolytic activation and delipidation of ATG8.
Statistics
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PSSM-Id: 515564
Aligned: 163 rows
Threshold Bit Score: 222
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2D1I_A        44 KDEILSDVASR-LWFTYRKNF------------PAIG--GT------------GPTSDTGWGCMLRCGQMIFAQALVCRH 96   human
A0BKU7        45 KKEIIQQIYSRtIWFTYRKNF------------PQIL--NS------------QQTSDAGWGCMLRSGQMIWAQILRVHI 98   Paramecium tet...
A0EHZ4        54 MEKLKSLFEGT-IWFSYRSKI------------LQLQ--YS------------TLTSDTGWGCMLRVGQMAMCQQIKYFY 106  Paramecium tet...
A0DFC4        56 INKIKQLVQDT-IWITYRRNF------------PPLY--QS------------NYISDTGWGCMLRVGQMAMAQMLKKHL 108  Paramecium tet...
A0CCT8        41 KEDILDVVIHT-IRFTYREGF------------QAYQcqNS------------TLTTDSGWGCVIRVGQMMMAELLKRHL 95   Paramecium tet...
XP_001028038 205 SKQILQIYQNT-ILFTYRKNFy-----------PLLK--DKind------pqkNQTSDAGWGCMIRAGQMIFAQTIKRHL 264 
Q240Z6       134 NNNFLKYHERV-IWFSYRNNF------------PLIRdvad---------dnqSVSNDYGWGCMIRCSQMLLAEALKRHY 191  Tetrahymena th...
Q7RK47       498 KLSTNNTINSK-IKNKYRHFFklkkkrkkkktdDTIS----------------IYMSDKGWGCMIRVVQMVLVNIFVKYT 560  Plasmodium yoe...
Q5CUG5        41 KKYFLKEFHDI-ILFTYRNEF------------KNII--ITrntvqltknyskNINSDVGWGCMYRVTQMSIAHGICQF- 104  Cryptosporidiu...
XP_001008186  16 LSQIKEAQHNL-IYFSYRSGFs-----------HQFQ--N-------------HIFSDSGWGCMLRSGQMIFANGLLRHL 68   Tetrahymena th...
2D1I_A        97 LGR--------------------------------------------------D--WRWt-------------------- 104  human
A0BKU7        99 r------------------------------------------------------------------------------- 99   Paramecium tet...
A0EHZ4           --------------------------------------------------------------------------------      Paramecium tet...
A0DFC4       109 k------------------------------------------------------------------------------- 109  Paramecium tet...
A0CCT8        96 -----------------------------------------------------KcfYNVnlfqfp--------------- 107  Paramecium tet...
XP_001028038 265 k------------------------------------------------------------------------------- 265 
Q240Z6       192 LNDqniqi----------------------------------------eqlsqD-------------------------- 205  Tetrahymena th...
Q7RK47       561 ISEdfmffhnlndyifyknslnnlntekllhekseekitkyhtekiklnklkeDktYEIyclkkvsksnishendncsil 640  Plasmodium yoe...
Q5CUG5       105 MKRflgnl------------------------------------------------------------------------ 112  Cryptosporidiu...
XP_001008186  69 k------------------------------------------------------------------------------- 69   Tetrahymena th...
2D1I_A       105 ---------------------------------------------------qR-K-RQPDSYFS---------------- 115  human
A0BKU7       100 ----------------------------------------------------QkKqHSKDYQYK---------------- 111  Paramecium tet...
A0EHZ4       107 ------------------------------------------------------NlSSSQELTE---------------- 116  Paramecium tet...
A0DFC4       110 ----------------------------------------------------NhGdKRDEDYDN---------------- 121  Paramecium tet...
A0CCT8           --------------------------------------------------------------------------------      Paramecium tet...
XP_001028038 266 ----------------------------------------------------KtDyIEQHQLIN---------------- 277 
Q240Z6       206 --------------------------------------------------------DEKHFYSN---------------- 213  Tetrahymena th...
Q7RK47       641 sknsnhtlngniktmhqqdqhnykyndisllglknrilsdnnnstssnntniShYfKCYKTYRDflmnsenniqdmnknn 720  Plasmodium yoe...
Q5CUG5           --------------------------------------------------------------------------------      Cryptosporidiu...
XP_001008186  70 ----------------------------------------------------EnPqIQNQLKIQnind------------ 85   Tetrahymena th...
2D1I_A       116 -----VLNAFIDR--KD---------------------------S-------------------YYSIHQIA-------Q 135  human
A0BKU7       112 -----LLCAFSDDddDEhkkmftd--------------nfklclS-------------------PYSIQKIE-------A 146  Paramecium tet...
A0EHZ4       117 -----LIQQFADN--DE---------------------------EelskfmdrndgdqtiqyksPFSIQKIV-------V 155  Paramecium tet...
A0DFC4       122 -----ILLAFADN--DSqe------------------------cKefiefqnkkekqkvhnficPFSIQKIA-------Y 163  Paramecium tet...
A0CCT8       108 plmqeVLQLFKDDdeME---------------------------Slkvqg---------kpskyGFSIQKIM-------R 144  Paramecium tet...
XP_001028038 278 -----IIIGFLEE--EEv--------------------------QeggkgyifnqqsyiqdrirPYSIHQITnrafckyK 324 
Q240Z6       214 -----IIKLFLDCtsESdvlnqpgsyqdiqskmllneqnlnniyS-------------------LFGIQNIC-------Q 262  Tetrahymena th...
Q7RK47       721 ylifpILSKFRDT--EN---------------------------A-------------------KYSIQNIIyeamkykK 752  Plasmodium yoe...
Q5CUG5       113 -niekILNNFQDN--ES---------------------------A-------------------KFSIHNMV-------N 136  Cryptosporidiu...
XP_001008186  86 -illfIIKFFIEN--KD---------------------------Q-------------------PFSIQQIA-------A 109  Tetrahymena th...
2D1I_A       136 MGVg--EGKSIGQWYGPNTVAQVLKKLAV-FDTWS--------------------------SL-----AVHIAMDn---- 177  human
A0BKU7       147 ISQi-kFSMKPCQWYRPDQILNALSLLHQqKQLEGs------------------------eDL-----EITISDS----- 191  Paramecium tet...
A0EHZ4       156 QTKl-eLQKSPGEWYKPNDILFVLKYLFRySKYQK--------------------------NL-----RMHINHEna--- 200  Paramecium tet...
A0DFC4       164 LAKk-eFNLDPGEWYKPNYILFLLEELHNtIPIRAs------------------------eNL-----KLSVFNDs---- 209  Paramecium tet...
A0CCT8       145 IAYe-eWGKKPGEWYSPNQIVQAIYKILSdNNIIYscglsllpfyesqidlkvilqemcvmENciceqRVFFIEKflqdl 223  Paramecium tet...
XP_001028038 325 I--------QPGQWYTPNQIAIILKELHKkNKIKGt------------------------eNL-----KIDVHSSdk--- 364 
Q240Z6       263 SAIlrqYQQNVKNWYTSIQVSVILQEILEeSQSKLn------------------------sKL-----GFHILNFtd--- 310  Tetrahymena th...
Q7RK47       753 IHKe-sIEKFVYEWFGPTNSAIIISNLINkKKVCFlrkk------------------rkntIIdkhvdKQNIIDRyknnt 813  Plasmodium yoe...
Q5CUG5       137 IGLs-eFGIDPTSWIGPTTSSMIANKLINdNRSIIs-------------------------NI-----QIASITYve--- 182  Cryptosporidiu...
XP_001008186 110 VALe-eFKLEMGFWYSPNRIAYSLKKLLNnFQTFS---------------------------------EMNIVSEv---- 151  Tetrahymena th...
2D1I_A       178 ---------------------tVVMEEIrr------------lCRTSvpcagatafpadsdrhcngfpagaevtN----- 219  human
A0BKU7       192 ----------------------LLYDRLysemyglkmdcehivNEIK---------------------------Qdknke 222  Paramecium tet...
A0EHZ4       201 ---------------------fILSDVIs-------------lMFNK---------------------------Nggdee 219  Paramecium tet...
A0DFC4       210 ---------------------cLFLDQLmnrmfdikfetdkdlEEQL---------------------------E----- 236  Paramecium tet...
A0CCT8       224 vrleinkeeviqvihgndsisdVYYEDL---------------SQQN---------------------------Kqeigm 261  Paramecium tet...
XP_001028038 365 ---------------------pIIFEKIlqtllgrqgkinlncNHEN---------------------------Qqsrns 396 
Q240Z6       311 --------------------qiIFLKELeeasrk---------------------------------------------- 324  Tetrahymena th...
Q7RK47       814 kcifvkkkyrnaffsiafetgvIYNNRVlkffq----------------------------------------------- 846  Plasmodium yoe...
Q5CUG5       183 --------------------gtIYRDQAvkhfs----------------------------------------------- 195  Cryptosporidiu...
XP_001008186 152 ----------------------MYSDRPlyfsqcvtamtgqkiDSTL---------------------------Pnnil- 181  Tetrahymena th...
2D1I_A       220 ----------------------------------------RPSPW--RPLVLLIPLRLGLTDIN-EAYVETLKHCFMMPQ 256  human
A0BKU7       223 i----------------------------------skicnICQKKdpKALAIFFITRIGLDEIN-KEYLPFLNDLIDLPQ 267  Paramecium tet...
A0EHZ4       220 w----------------------------------lkeqiEKGQNdeFGVSIFILTRIGLDTCN-QEYLKVLNDIMTYPQ 264  Paramecium tet...
A0DFC4       237 ----------------------------------------KTQLKskNSLAIFVLTRIGLDEPN-QKYLKVLDELMELPY 275  Paramecium tet...
A0CCT8       262 l---------------------------------lkkyvcQKCFVpiRAVAICLLSRIGCDEPN-PDYIQAIRQFMKKKY 307  Paramecium tet...
XP_001028038 397 inqdqddsfekimppnqqeieefssqyeeskedqtdnlccKDCFKtdNKLFLLLPCRLGLDEIS-PIHIEILKKLLSLKQ 475 
Q240Z6       325 ------------------------------------------qndrlNNILVMVHLKFGINKFE-MQHKDYFIELLKIKN 361  Tetrahymena th...
Q7RK47       847 -------------------------------------------ikqkvFVIIWVCLKLGIDSKSiLKYKQSILSCFRLKQ 883  Plasmodium yoe...
Q5CUG5       196 ------------------------------------------evgsdSCTFVWLCMKLGTSKFNiNSYKKTVISMSNVSQ 233  Cryptosporidiu...
XP_001008186 182 -------------------------------------vdaNKNYEkkQSLILLIICQIGLDYPE-EKYLDILIKLFTHRL 223  Tetrahymena th...
2D1I_A       257 SLGVIGGKPNSAH--YFIGYVGEE-LIY-LDPH-TTQPAV--E-PTDGCFIPD-ESFHCQHpPCRMSIAELDPSIAVGFF 327  human
A0BKU7       268 FQGIIGGRDDKAY--YILGRVNKR-LIY-LDPH-YIQEHI----NRGNVVMLK-DTFFCKD-VKYINEEQMSPSIALGFY 336  Paramecium tet...
A0EHZ4       265 FQGILGGFPNKAL--YILGRVGNY-YIY-LDPH-YVQNAQ----NYQEMENDR-SSYTCQS-IQLIDSNQLDPSMAISFC 333  Paramecium tet...
A0DFC4       276 FQGIVGGTPKRAF--YILGRINDH-YIY-LDPH-YVQEAEnkGqIIENKMFNR-TSYSCKY-IHLLNQKHVDTSMGLSYY 348  Paramecium tet...
A0CCT8       308 FAGLLGGRPREAN--FIVGFVDDK-FVV-LDPH-LVQQAN------MNPEEYV-KSCFPGE-ALFMSDKEIDCSLGLVFY 374  Paramecium tet...
XP_001028038 476 SVGMIGGKPNKAH--YFLGFVGDD-LLY-LDPH-YIKECV----RKEDLMENI-SSYFEED-VFKMPINKISTSLVFGFY 544 
Q240Z6       362 FVGALSGTETKGM--YIIGFQEDR-LIV-LDPH-FIQKSTe---GEQGLDKDY-CTYFNKT-PRSISLECLSSDISLGYF 431  Tetrahymena th...
Q7RK47       884 FQGISGGNTYTSA--YYFYSANDNgLFY-IDPHiKCQKAF------TDLNTNIsSEFFMHR-IKLLPWEHLNSSMSLVY- 952  Plasmodium yoe...
Q5CUG5       234 FICIMGGNNYSSGalLIVAFSNS--FLYcLDPHiKVLPSF------SDKNFIR-DDFIQKV-PTRIYWGELNSSLSMVYI 303  Cryptosporidiu...
XP_001008186 224 SIGMIGGKHSSGY--YFTGLNNDK-LTY-LDPH-IVQHAD-----INTNEINL-KTYFQEE-VKQINKHALGPSVGLGFY 291  Tetrahymena th...
2D1I_A       328 CK-TEDD-FNDWCQQ 340  human
A0BKU7       337 CQ-NQSE-LDKFFNS 349  Paramecium tetraurelia
A0EHZ4       334 VK-NALD-LLDLWRR 346  Paramecium tetraurelia
A0DFC4       349 IR-NKSE-LLQFWRD 361  Paramecium tetraurelia
A0CCT8       375 LK-NEEDlIELIYDI 388  Paramecium tetraurelia
XP_001028038 545 FS-GVDE-LNKFYKF 557 
Q240Z6       432 IQvNEEQsINQFIDQ 446  Tetrahymena thermophila SB210
Q7RK47       953 ---SKDD-YFDLIHN 963  Plasmodium yoelii yoelii
Q5CUG5       304 CR-NLED-FDDLCSN 316  Cryptosporidium parvum
XP_001008186 292 LK-DLND-LNEFWGY 304  Tetrahymena thermophila SB210
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