3GGY


Conserved Protein Domain Family
Ist1

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pfam03398: Ist1 (This model is not part of the current CDD release)
Regulator of Vps4 activity in the MVB pathway
ESCRT-I, -II, and -III are endosomal sorting complexes required for transporting proteins and carry out cargo sorting and vesicle formation in the multivesicular bodies, MVBs, pathway. These complexes are transiently recruited from the cytoplasm to the endosomal membrane where they bind transmembrane proteins previously marked for degradation by mono-ubiquitination. Assembly of ESCRT-III, a complex composed of at least four subunits (Vps2, Vps24, Vps20, Snf7), is intimately linked with MVB vesicle formation, its disassembly being an essential step in the MVB vesicle formation, a reaction that is carried out by Vps4, an AAA-type ATPase. The family Ist1 is a regulator of Vps4 activity; by interacting with Did2 and Vps4, Ist1 appears to regulate the recruitment and oligomerisation of Vps4. Together Ist1, Did2, and Vta1 form a network of interconnected regulatory proteins that modulate Vps4 activity, thereby regulating the flow of cargo through the MVB pathway.
Statistics
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PSSM-Id: 515552
Aligned: 110 rows
Threshold Bit Score: 149.543
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3GGY_A         13 KTCLKMCIQRLRYAQEKQQAIAKQSRRQVAQLLLTNKEQKAHYRVETLIHDDIHIELLEILELYCELLLARVQVINDIST 92   brewer's yeast
NP_001288461   22 KTLLKLSIPRIKLLRNRRELQLRQMRRDIAKLLEAGQEATARIRVEHIIREENMMAAQEILELFCELIAVRLPIIEAQKE 101 
CAL9049371     18 KTCLNLAISRIKLLRNKRELQLKQMRKEISQYIQTGQEAIARIRVEYIIREQNILAAYEIIELFCEFVLARVPVLESQRD 97  
XP_004236982   18 KTCLTLAISRIKLLQNKRDAQLRLMRKEIAQFLQTGQEAIARIRVEHIIREQNVWAAYEILELFCEFVFARVPILESQKE 97  
XP_006340805   32 KTMAKMTVARIKLLRNKREVVVRQMRRDIAMLLESRQDATARIRVEHVIREQNILQANEILELFCELIVARLTIIAKQKQ 111 
XP_006853993   12 KTSLKLAIARIKLMKNKKGVQLKQMKRELAQLLQAGQEQNARIRVEHVIREENTRAAYDIIELFCELIVARLPIIESQKH 91  
XP_044357438   22 KIALKMAMARIKLLRNKKEVQVRQMRREVAQLLDGNQDQTARIRVEHVIREEKFMQAYDLIEVYCELIVARMSIIDSQKT 101 
XP_040871611   13 KTALTLAVPRIKLLKNKREANVKQLRRELAQLLHSGHNHAARVRVEHVVKEEKTMAAYDLIKIYCDLIAARMPMIESQRN 92  
XP_002514165   12 KTALKLAVSRIKLLKNKRDAQVKQLKRELAQLLESGQDRTARIRVEHVVREEKTLAAYDLIEIYCELIVARLQIIESQKN 91  
NP_564235      18 KTSLNLAIARMKLLQNKRDMQLKHMKKEIAHFLQAGQEPIARIRVEHVIREMNLWAAYEILELFCEFILARVPILESEKE 97   thale cress
3GGY_A         93 eeqlvkehMDDGINEAIRSLIYAILFVdEVKELSQLKDLMAWKINVEFVNGVIAD-HId-VPEKIIKKCSPSVPKEELVD 170  brewer's yeast
NP_001288461  102 --------CPIDLKEAISSVCFAAPRCaDLPELMQVQMMFATKYGKEFVAAASELmPDcgVNRQIIELLSIRPPPVDAKL 173 
CAL9049371     98 --------CPLELQEAISSIIFASPRCsDLPELLHIRNLFSTKYGKEFVAAASELrPEsnVNRMIIEKLTARAPPAELKI 169 
XP_004236982   98 --------CPSELREAVASIIFAAPRCsDLPDLLHVRNLFAAKYGKEFIAAASELrPDtsVNRTIVEKLSVGAPSAELKL 169 
XP_006340805  112 --------CPADLKEGISSLIFAAPRCsDIPELMGIKDVFEKKYGKDFVSAATDLrPNagVNRTLIEKLSVKTPSGEVKL 183 
XP_006853993   92 --------CPIDLKEAIASLAFASPRCaDIPELLDVQKHFAAKYGKDFISSSLELrPGcgVNCTMIEKLSVRAPNGETKI 163 
XP_044357438  102 --------CPIDLKEAIASVIFASMRCsDVTELADVRKNFTSKYGKEFATSALEVrPDsgVNRLVIEKLSAGAPDVQTKT 173 
XP_040871611   93 --------CPIDLKEAISSVIFASPRCsDIPELVVVKKHIMAKYGREFVSAAVELrPDcgVNRLLVEKLSTSAPDGPTKI 164 
XP_002514165   92 --------CPIDLKEAISSVLFASPRCaDVPELMDVRKHFTAKYGKEFVSAAVELrPDcgVSRLLVEKLSAKAPDGPMKM 163 
NP_564235      98 --------CPRELREAIASIIFAAPRCsEVPDLLQIKNLFGTKYGKEFIMVASELrPDsgVNRTIIEKLSPTSPSGAARL 169  thale cress
3GGY_A        171 LYLKEIAKTYDVP 183  brewer's yeast
NP_001288461  174 KLLKEIAEEHEVD 186 
CAL9049371    170 KVLKAIAQEYNLV 182 
XP_004236982  170 NVLKEIAKEYNVE 182 
XP_006340805  184 KIMKEIAKEYQVE 196 
XP_006853993  164 KILTAIAKEHNID 176 
XP_044357438  174 KTLSSIAAEHNIK 186 
XP_040871611  165 RILTAIAEEHNVQ 177 
XP_002514165  164 KILSAIAEEHNVK 176 
NP_564235     170 KMLKEIAQEYSLN 182  thale cress
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