Conserved Protein Domain Family

pfam03377: TAL_effector 
TAL effector repeat
The proteins in this family bind to DNA. Each repeat binds to a base pair in a predictable way. The structure shows that each repeat is composed of two alpha helices.
PSSM-Id: 397449
Aligned: 41 rows
Threshold Bit Score: 32.0357
Threshold Setting Gi: 704000338
Created: 11-May-2020
Updated: 7-Aug-2020
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
Format: Row Display: Color Bits: Type Selection:
4CJ9_A  226 NGGAQALHAVLDLGPTLRE--CGFSQATIAKIAGN 258  Paraburkholderia rhizoxinica
Q5H0J1  336 RGGVTAVEAVHAWRNALTGapLNLTPDQVVAIASN 370  Xanthomonas oryzae pv. oryzae
Q8XYE3  752 hGGKQALEAVRALFPDLRAapYALSTAQLVAIASN 786  Ralstonia solanacearum GMI1000
Q8XYE3  892 DGGKPALEAVWAKLPVLRGapYALSTAQVVAIAci 926  Ralstonia solanacearum GMI1000
Q8XYE3  857 NGGKQALEAVWALLPVLRAtpYDLNTAQIVAIASH 891  Ralstonia solanacearum GMI1000
Q8XYE3  507 NGGKQALEAVKAHLLDLRGvpYALSTEQVVAIASH 541  Ralstonia solanacearum GMI1000
Q8XYE3  612 DGGKQALEAVGAQLVALRAapYALSTEQVVAIASN 646  Ralstonia solanacearum GMI1000
Q8XYE3  577 gGGKQALEGIGEQLLKLRTapYGLSTEQVVAIASH 611  Ralstonia solanacearum GMI1000
Q8XYE3  926 iSGQQALEAIEAHMPTLRQasHSLSPERVAAIAci 960  Ralstonia solanacearum GMI1000
Q5H0Z0  838 DGGKQALETVQRLLPVLCQa-HGLTPDQVVAIASH 871  Xanthomonas oryzae pv. oryzae
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap