3F6N


Conserved Protein Domain Family
Cauli_DNA-bind
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pfam03310: Cauli_DNA-bind (This model is not part of the current CDD release)
Caulimovirus DNA-binding protein
The gene III product of cauliflower mosaic virus (CaMV) is known as virion-associated protein or P3, which is tightly associated with the virus particles and has a regulatory function in the virus infection cycle. P3 decorate the virions; its N-terminal domain forms an antiparallel alpha-helical coiled-coil network at the surface and the C-terminal domain interacts with the C-terminal half of the coat protein. It is a DNA binding protein in which the DNA binding activity is located on its C-terminal part.
Links
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Statistics
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PSSM-Id: 515504
Aligned: 12 rows
Threshold Bit Score: 95.6399
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
3F6N_A         8 QKEVSEILSDQKSMKADikaile---llgsqnPIKESLETVAAKIVNDLTKLIND-----------CPCNKEileal--- 70  Cauliflower mos...
YP_001931965   8 GAKLDALSQKVNELLKE---------------KQVDKTESAAAKIIKDLSDRIEKdkqelisliksCPCGRHd------- 65 
P09522         5 LSEIRELIQSLTKTANEikamle---rnsagkP--TGIEEAAAKIIKDIGDKIDQ-----------CECTKKieemld-- 66  Figwort mosaic ...
Q8JTA4         4 ISELAVLIEELKKEVADlvttvkdlakdkspeTDQNALKSLGAKIIKDISDKIDQ-----------CECTDKlfdr---- 68  Mirabilis mosai...
YP_009165748   3 LKEVSEVLEKIKKLVEQteall---------ekskEIVEASAAKVINDITAKLEK-----------CQCNKEildalke- 61 
YP_001931959   6 LKEIHDLIIQVLEEIKSlkkd-------indySKDSNNEAIAAKIITDIAEQIKK-----------CPCNKEildvl--- 64 
YP_009666501   8 SKDLENIVIPILKEIKEmlns-------qkqdSIKELIEAASAKIIMEMKK---------------CPCNEEilaaln-- 63 
P05398         7 ASEIEVVKTNQKTIESKidqila---kigstpDESSNLESVAAKIISDLTKEMKE-----------CHCNKEivei---- 68  Carnation etche...
P03551         8 QKEVSEILSDQKSMKADikaile---llgsqnPIKESLETVAAKIVNDLTKLIND-----------CPCNKEileal--- 70  Cauliflower mos...
Q5J1S3         8 QKEVSQALEEIRSLKKDteaila---klgsteP--NNLEAIAAKIINDVTKVIRD-----------CPCNKEileafa-- 69  Horseradish lat...
KAH0699180     2 DKKIDQILDllrn---------------kpqsQEIEKMEQIAAKIITDIANKIDK-----------CECNKEitellknk 55 
Q7THB6         4 IKDLAALIEGLREEISKlkaeit---skdtgpTDNTALESLGAKIIKELSDKMDK-----------CECTERlkkelq-- 67  Dahlia mosaic v...

3F6N_A        71 ----------gtqpKEQLIEQPKE-----KG--KGLNLGK----YSYPNYGVGNEELGSSGNPKALTWPFK 120 Cauliflower mosaic virus...
YP_001931965  66 --------------DPKTPPEPTKkgpeePGtsKDPNPPKpvipYSYPNWNVGDEAYGSSKGPNPPSWPPR 122
P09522        67 ---------qkqnaDTQIVPTKQE----------SSGLVK----YSYPNWNVGNEELGSSGNPNAVKWPPR 114 Figwort mosaic virus (ST...
Q8JTA4        69 -----------lkgKGSVIPTQQEt----PEvsEGAKYQK----YSWPNHNVGNPELGSSGVKNPVYWPPT 120 Mirabilis mosaic virus
YP_009165748  62 -------ikgepskELAVTGKDDP-----KGksKSFPLEK----YSFPNYRVGNAELGSSGNPNAVVYPPE 116
YP_001931959  65 ----------knskDKQVIPHQGKp---dTSsdKPSSLQK----YSYPNFRVGNEELGESKNPDSLRWPEG 118
YP_009666501  64 --------kqpeskDKQIVPFEEQs--------EKPRRML----YSFPNDSVGFEQLGTGKNKNSIVWPPQ 114
P05398        69 -----------lnkDKAIIPSPEQ-----DSiqKRLSEPQ----YTFPNFDVGNEGMGSSTNPNALKWPPT 119 Carnation etched ring virus
P03551        71 ----------gtqpKEQLIEQPKEk-------gKGLNLGK----YSYPNYGVGNEELGSSGNPKALTWPFK 120 Cauliflower mosaic virus...
Q5J1S3        70 ---------kqpekKGEIIPSNKPg-------sSSSKLKK----YSYPNTGVGNSNLGSSENPKALTWPFG 120 Horseradish latent virus
KAH0699180    56 aginrsksagdlpkDDQIQKTPKE-----PEtkKPVQGWR----YKWPNYNVGNAELGSSGNPKAMRWPED 117
Q7THB6        68 ---------eqpdkGKQIVSPDKQ-----ESstPSSNFTR----YSYPNWNVGNASLGSSGNPDALKWPPV 120 Dahlia mosaic virus
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