2O0K


Conserved Protein Domain Family
Terminase_6

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pfam03237: Terminase_6 
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Terminase-like family
This family represents a group of terminase proteins.
Statistics
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PSSM-Id: 397374
Aligned: 23 rows
Threshold Bit Score: 115.212
Threshold Setting Gi: 38707825
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2O0K_A    183 CNLSRQLGKTTVVAIFLAHFVCFNKD----------------------KAVGIL-AHKGSMSAEVLD----------RTK 229 Escherichia virus T4
Q835C2     60 IEIPPQHGKSTVITETFPAYYLMRHPd---------------------SLVMVV-SYSKELFQKFGR----------KNR 107 Enterococcus faecalis
CAP45467   47 AMTGNRCGKTYTGAFIMACHLTGRYPewwtg------------rkydrPVNCWAaGISTDTTRDILQsellgdwknpEAF 114 Pseudomonas virus ...
Q92NY5     62 FMAGNQLGKTLAGAAEAAMHLTGRYPdwwqg------------rrfdrPIVMLAgSESYELTRDGVQrlligpplneEEW 129 Sinorhizobium meli...
P26745     58 FMAGNQLGKSFTGAAEVAFHLTGRYPgtkgypadgkyggewkgkrfyePVVFWIgGETNETVTKTTQrilcgrieenDEP 137 Salmonella virus P22
Q8TJF9     24 YGESAGSGKSWCLLYEPLRHIHVKGF----------------------TSTIFR-RTYPQIKNEGGLwdtsqeiypyYPK 80  Methanosarcina ace...
Q2YMT3      1 -MGGRGSGKTRAGAEWVSGMALGLPPfagk---------------psgHIALVG-ETFNDAREVMVD----------GPS 53  Brucella abortus 2308
NP_944884  91 YGGAAGAGKTAALLMDSLRFIEDPNY----------------------NAVYFR-RNTTQLQ--GGLwpaa---kklFGK 142 Salmonella phage F...
Q9PQX4     34 LLGGRSSGKTFATLDFLSSLVAIKQQ----------------------NAIYVFrQNISDAKKI-------------FSD 78  Ureaplasma parvum
O50924     66 FSGGIASGKTFLASYLLVKKLIENKSfye----------------qdtNNFIIG-NSIGLLMT--------------NTV 114 Lyme disease spiro...
2O0K_A    230 QAIELLPD-FLQPGIVewnkg-----------sielDNGSSiGAYAS--------SPDAVRG------NSFAMIYIEDCA 283 Escherichia virus T4
Q835C2    108 EKFRLFSDqLFGLQISset--------------ssvSEWGVeGHLGSlys---tsILGGATG------RGARLLIIDDPI 164 Enterococcus faecalis
CAP45467  115 GTGMIPKEdIVETIRRegkpgcvq-----avvvkhtSGGLSsLIFKSye-----mSQDKFMG------TAIDVIWLDE-- 176 Pseudomonas virus ...
Q92NY5    130 GTGFLPKAaIKATTRRagasgald-----svtvrhvSGRAStLLFKAye-----qGRAKWQA------NTVDYVWFDE-- 191 Sinorhizobium meli...
P26745    138 GYGSIPKEdIISWKKSpffpnlvdhllvkhhtadgvEDGISiCYFKPys-----qGRARWQG------DTIHGVWFDE-- 204 Salmonella virus P22
Q8TJF9     81 GSAIPRES-DLLWYFP--------------------VSGNS-IKFAHleh---ekSKHNYQG------AQICYIGFDELC 129 Methanosarcina ace...
Q2YMT3     54 GILSVSRL--VRPRYEasrr------------rliwDNGAV-ATLFSse------dpDSLRG------PQFDAAWCDELA 106 Brucella abortus 2308
NP_944884 143 FGGIPHEQ-KMTITFP---------------------SGAT-IKFTYlel---ekHAEGHQG------IEYSAIYFDEGT 190 Salmonella phage F...
Q9PQX4     79 YLNFLDQKqLLKFAKInhser------------tviiNGWT-VMFEAlnetrnniNKGAKVGfrlwtqARYVFAFFEEAS 145 Ureaplasma parvum
O50924    115 KQIEKICS-LLGIDYEkkksg----------qsfckIAGLK-LNIYGgkn---rdAFSKIRG------GNSAIIYVNEAT 173 Lyme disease spiro...
2O0K_A    284 FIPNFHDSWLAIQPVISSGRRSk-iIITTtPNGLNHFYDIWTAAVEGKSg------------------------------ 332 Escherichia virus T4
Q835C2    165 KNRAEAESKTIRDKIYNEWQDT---FYSR-LTADASVIVIMTRWHEDDLagrll-------------------------- 214 Enterococcus faecalis
CAP45467  177 ECPKDIYTQCVTRTATTGG------IVYLtFTPEHGLTEIVKDFLQDL-------------------------------- 218 Pseudomonas virus ...
Q92NY5    192 EPPEDVYFEGITRTNATRG------AIAVtFTPLRGLSAVVARYLMEK-------------------------------- 233 Sinorhizobium meli...
P26745    205 EPPYSIYGEGLTRTNKYGQ------FSILtFTPLMGMSDVVTKFLKNP-------------------------------- 246 Salmonella virus P22
Q8TJF9    130 HFSEGQFFYLLSRNRSTCGVKPy-mRATCnPDPDSWVADFIAWWIDQETgypipersgviryfvrhldhiywadtktelr 208 Methanosarcina ace...
Q2YMT3    107 KWKNPQETWDMLQFGLRLGDNPr-qVVTTtPRAVPLLKALLTDRT----------------------------------- 150 Brucella abortus 2308
NP_944884 191 HFSASQISYLQTRLRSGAEGDSy-mKISMnPDRDHFIYDWVEPFLDEEGypdpekcgrirwyvmndgv-------mvsdw 262 Salmonella phage F...
Q9PQX4    146 QLDFNLVKNSQQSLRGTKDTQVvsiFASNpWTSEHWYIENFNNHLAENEfsiqq-------------------------- 199 Ureaplasma parvum
O50924    174 VIHRETLLEVIKRLRKGKEIII---FDTNpESPAHYFKTDYIENTDVF-------------------------------- 218 Lyme disease spiro...
2O0K_A    333 -------------FEPYTAIWNSVKerlyNDEDIFDDGWQWSIQTINGSSLAQf--RQEHTAAFEG----------TS 385 Escherichia virus T4
Q835C2    215 --------keqtlPWEEIKIPAIAEd---DDLLGRKPGEALAPEIGKDEEWAAk--TKAVTGSRGWaalyqqrptpAG 279 Enterococcus faecalis
CAP45467  219 -----------------KPGQFLVHa---SWEDAPHLSPEVKEQLLSVYSPAEr--RMRAEGVPML----------GS 264 Pseudomonas virus LUZ24
Q92NY5    234 -----------------SPDRAVITm---TIEDAEHYTPQERQRVIDSYPAHEr--EARTRGVPAL----------GS 279 Sinorhizobium meliloti
P26745    247 -----------------SKSQKVVNm---TIYDAEHYTDEQKEQIIASYPEHEr--EARARGIPTM----------GS 292 Salmonella virus P22
Q8TJF9    209 eqtkdiipeedfhPQSFTFIAAKLE----DNPALTTKDPGYRGRLLALPLVER---ERLLGGNWKIr--------hTA 271 Methanosarcina aceti...
Q2YMT3    151 -----------------VSMTHM-R----TAENAGNLAEGFMQTIARRYAGTRl-gRQELDGELVEe---------RP 196 Brucella abortus 2308
NP_944884 263 erdkilemfpleiPQTYTFISGTID----DNPILDFLEPKYRGKLENNTPVNV---ARLRFGNWKAr--------aEG 325 Salmonella phage Fel...
Q9PQX4    200 ---------kpyyEYSVVDKKLFLRs---TYRANKFTSQQEIEQFEWWKDIDYskyRVISLGLSGS----------VE 255 Ureaplasma parvum
O50924    219 ---------------------KTYNf---TTYDNPLNSADFIQTQEKLYRRFPayrARVLYGEWIL----------NE 262 Lyme disease spirochete
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