1IUF


Conserved Protein Domain Family
HTH_Tnp_Tc5

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pfam03221: HTH_Tnp_Tc5 
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Tc5 transposase DNA-binding domain
Statistics
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PSSM-Id: 397365
Aligned: 151 rows
Threshold Bit Score: 36.079
Threshold Setting Gi: 190589410
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1IUF_A               82 YPLLEAALFEWQVQ----QGDDATLSGETIKRAAAILwhkiPEYQDQPVPNFSNGWLEGFRKRH--ILH 144  fission yeast
XP_001957388        106 CAYINAVVYEWLVRaninPQLRGSITHGMIKDKAENa----RQVIGSTSFIADNRWLNRFRETHlqGFA 170  Drosophila ananassae
WGS:AAPP:GF24198-PA 106 MSAISFLLREWVERcr-qLHLNISITNQKLKDTALRM----AAILNLPSFRPSYRWLNRFRGKY--KYE 167  Drosophila ananassae
XP_001984637        111 MSAISFLLHEWVERcr-qLCLGVTIRNHTLKETALKM----AAVLKLPAFRPSYRWLNRFRSKY--KYE 172  Drosophila grimshawi
WGS:AAPP:GF24076-PA 153 VSMLGKAVYDWIRRm--mYYKDFSISDGLIQKMALQF----KSSMGLAHFFPHQEWCDKFRRTY--RLN 213  Drosophila ananassae
XP_001957390        110 LRFLGHCLYEYIQRa--qYYLNTEITEELIRNRAQDF----RDLLRLEGFVPSKSWMNHFKAKF--NIT 170  Drosophila ananassae
EDV96059             91 LNFLGHCLYEYIQRa--qYYLNVDINEELIRTKALEF----QTLMDIDNFVPNKSWINHFKAAY--NIT 151  Drosophila grimshawi
EDO18449             72 NVLVRRVLQEWISQs---LWNGIPITIPILQQTAQSVwhklAEEHREGDGSFSSKWINTCLSKMglDIA 137  Vanderwaltozyma po...
EJT41424             72 nllVRKILQEWISQs---LWNGIPITSPIIQDTAQAVwhriPAEHREGNGSFSYKWISNFLSKM--DVN 135  Saccharomyces kudr...
jgi:OSTLU_119479    227 LDQLAKIVKHYIR-------VGISLSQETILSMAKNFyr-dEHHADPSDKTFGSAWFYRFLNRH--GID 285  Ostreococcus lucim...
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