3C0W


Conserved Protein Domain Family
LAGLIDADG_2

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pfam03161: LAGLIDADG_2 
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LAGLIDADG DNA endonuclease family
This is a family of site-specific DNA endonucleases encoded by DNA mobile elements. Similar to pfam00961, the members of this family are also LAGLIDADG endonucleases.
Statistics
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PSSM-Id: 397327
Aligned: 39 rows
Threshold Bit Score: 130.009
Threshold Setting Gi: 38372545
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3C0W_A        34 FEAGIGLILGDAYI--RSRDEGKTYCMQFEW---KNKAYMDHVCLLYDQWVLSPPHKKERVNHlgnLVITWGAQTFKHQA 108 baker's yeast
XP_002975309 689 RAILAGVLLAGTRMt-AASYNGACIHFEQDAesyKGQALIHNLYEIFTDWAVETPKVVEDSGG---QGRKLHFQTTPNVK 764 Selaginella moe...
ERN01238     553 REILIGLLLGGTRIksDEAKKNHTIHFEFNEnsdAHGALKVHIYERFYEWLTPFGNISDRN-----DEIPCHFSSKAHPH 627 Amborella trich...
XP_009387640 575 REILVGLLLGGVRIesDEERRNHIILFEFSEnsnIHSVLRVHIHERFYEWLTLSSRSNDDD-----NEMPYRFSTIAHSY 649 wild Malaysian ...
XP_006349130 596 REVLTGLLLGGVQIrsDGERRLHAIHYEFNEesrIHSIFKKHIHDEFHEWLGSHDMMVDST-----ADIPNSFTTISHSY 670 potato
Q9XIL5       632 REVLVGLLLGGLQIesDKEKKSHMIKFEFREnsqAHLVLKQNIHDQFREWLHPLSNFQE-------DIIPFEFYSVPHSY 704 thale cress
CDY36656     594 REVLVGLLLGGLRVesDRERKSHKIMFEFREksqAHLILRQHIHDQFREWLPHSEE----------EDIPLEFSSISHSC 663 rape
XP_003556633 532 REILIGLLLGGLQIdsDDQRRNHIIRFDFDRnsgSHYVLKSHIYHQFYEWLHPTCKPGDNS-----ENIPDKFCTIASSH 606 soybean
EEF40474     624 REILVGLLLGGLRVesDDNRKKHMIRFEFNEnssTHAILRRHLYDKYHEWLHPSCKLSDGS-----DGASYRFSTISHSY 698 castor bean
CBI32449     580 REILIGLLLGGLQMesDEERKNHVIYFEFNEnsgAHSVLRRHIHEQYHEWLNSSSKLSDDN-----DDVPYKFSTISHSY 654 wine grape
3C0W_A       109 FNKLANLFIVNNKKTIPNNlVENYLTPMSLAYWFMDDGgkwdyNKNSTnkSIVLNTQSFTFEEVEYLVKGLRNKfQLNCY 188 baker's yeast
XP_002975309 765 FYFYYHQYRPNGEQKIPRL-VHRWIPELTLAYWYMYGG-----HRSLDgrSMVFNAEAYDHKELCLVVEAMYER-RIQCR 837 Selaginella moe...
ERN01238     628 FGFFADQFWPKRRLVIPKL-IHRWLSSRVLAYWYMYGG-----YTTSSg-DILLKLRDCSHEDAERVIKTLKAK-SLDCR 699 Amborella trich...
XP_009387640 650 FGFFADQFWLKGRLMIPKL-VHRWLSARVLAYWYMYGG-----LRSSSg-DILLRLKGGSREDTERIIRAFQAK-SLGCR 721 wild Malaysian ...
XP_006349130 671 FTFYADQFWPNGRPCIPKL-IHRWLSPRVLAYWYMYGG-----YRTSSg-DILLRVK-GSSEGVVSILKALKAK-SLNCR 741 potato
Q9XIL5       705 FGFYAEHYWPKGQPEIPKL-IHRWLSPHSLAYWYMYSG-----VKTSSg-DIILRLK-GSLEGVEKVVKALQAK-SMECR 775 thale cress
CDY36656     664 FGFYADNFWPNGRPEIPKL-IHRWLSPESLAYWYMYSG-----YRTSSg-DVILRLK-GSVEGVEKVVKALRAK-SMECR 734 rape
XP_003556633 607 FGFYADQFWSKGEPTIPKL-VHRWLSPCVLAYWYMYGG-----HRNSSg-DILLKIK-GSREGVENIVRKFKAM-SMDCK 677 soybean
EEF40474     699 FSFYAEQFWPKGQPMIPKL-IHRWLSPQVLAFWYMYAG-----HRTSSg-DILLKLK-GSREGVEKVFKTLKSK-SLNCK 769 castor bean
CBI32449     655 FGFYADQFWPRGRPMIPKL-IHRWLSPRVLAYWYMYGG-----HRTSSg-DILLKLK-GSREGVEKVVRTLKAQ-SMDCR 725 wine grape
3C0W_A       189 VKINKNK-PIIYIDSMSYLIF 208 baker's yeast
XP_002975309 838 IMRDERGkHYLEISSESavwl 858 Selaginella moellendorffii
ERN01238     700 FKRKGRV-FWIACQGNNATWF 719 Amborella trichopoda
XP_009387640 722 VKRKGRV-FWMGFQGTNADMF 741 wild Malaysian banana
XP_006349130 742 VKKRGRV-FWIGFLGDNATFF 761 potato
Q9XIL5       776 VKKKGKV-FWIGLQGTNSALF 795 thale cress
CDY36656     735 VKKKGNV-FWIGLQGTNSVLF 754 rape
XP_003556633 678 VKRKGRV-FWIGILGSNSTWF 697 soybean
EEF40474     770 VKRKGRV-FWIGFLGNDsvwf 789 castor bean
CBI32449     726 VKRKGTV-FWIGLLGSNSTWF 745 wine grape
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