2DB9


Conserved Protein Domain Family
Plus-3

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pfam03126: Plus-3 
Plus-3 domain
This domain is about 90 residues in length and is often found associated with the pfam02213 domain. The function of this domain is uncertain. It is possible that this domain is involved in DNA binding as it has three conserved positively charged residues, hence this domain has been named the plus-3 domain. It is found in yeast Rtf1 which may be a transcription elongation factor.
Statistics
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PSSM-Id: 397304
Aligned: 175 rows
Threshold Bit Score: 50.6449
Threshold Setting Gi: 67478644
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2DB9_A        20 LNRVRLSRHKLERWC-HMPFFAKTVTGCFVRIGIG--NHnsKPVYRVAEITGVvetAKVYQLggtrTNKGLQLRHG--Nd 94 
EEF33537     370 IKRLYLKRSLVQELEkQSEIFDAKVIGSFVRTKSDpyDYlqKNPYQLLKVTGIlslV----Vn---TDIFLQVCNMpiD- 441 castor bean
XP_015165024 671 IKLVYLKRSLLLEMIkKPESFETKIIGSFVRVKLDprDFelRNSHQLVQITGIkhgS-SDNCc---CKSLIQVSNIteN- 745 potato
XP_006349421 364 INLIYLKKSLVMELIkQPESIETKIIGSFVRVKLDprDSeqCNSHQLMQITGIklgS-SDMCn---SESSIQVSNMagD- 438 potato
XP_010657936 166 LKLVFLKRSLVLELLkQPDSFQRKIRGSFVKVKSGahLYshHLSYQLFQVIGVkkaSKTGEId---SEILLQAPLa-kD- 240 wine grape
CBI29667     360 IKLIYLKRSLMLELLkQPDTFESKVKGSFVKVKADsyWYsqNQTHQLFQVTGIkktSETQEIn---AEILLQVPNa-kD- 434 wine grape
XP_003533272 177 IKLVYMKRSLVMDLLkDPETFETKVVGSFIRIRCDpnDYlqKNSHQLLQVTGTkksS---EVn---GEIHLQVSGFikD- 249 soybean
XP_002871326 157 IKLLYLRKSLVQELVkSPDTFESKMLGSFVRIKSDpnDYlqKYPYQLVQVTGVkkePGTD-------DFLLQVTNYvkD- 228 Arabidopsis lyr...
EEF33612     168 IKRIYLRRTLVQNLLkEPEAFERKIIGSFVRVKSDphDYlqKNSHMLVQVIGWkkaSDSDGKs---GEIILQVSNFmkD- 243 castor bean
EEF49127     244 MKLVYLRRSLVEQLLsDPESFEKKVVGSFVRVKIGpkDCtrRKSHQLLQVTGMkqtSTTAETn---GQIVLKLFNVpkD- 319 castor bean
2DB9_A        95 qrvFRLEFVSNQEFTESEFMKWKEAM 120
EEF33537     442 ---IPICKLSDDNFSEEECEDLRQRV 464 castor bean
XP_015165024 746 ---VCLNTLSDDEFSNEECDEFRKKV 768 potato
XP_006349421 439 ---VSLTKLSDAEISVEECNVFREKV 461 potato
XP_010657936 241 ---IHIDMLVEHDLTKEECEEYRQKV 263 wine grape
CBI29667     435 ---IRINMLAELDLTEGECEDYRQKV 457 wine grape
XP_003533272 250 ---IRIQMLSDDNFSEEECENLHQRV 272 soybean
XP_002871326 229 ---VSISVLSDDNFSQEECEDLHQRI 251 Arabidopsis lyrata subsp. lyrata
EEF33612     244 ---VSISMLSDENFSEEECQDLRQRI 266 castor bean
EEF49127     320 ---VSISMLSDVDFCEEEIDELRQLV 342 castor bean
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