6PPB,7BSI,6LGL,6CGR,8TEP,6Q1F


Conserved Protein Domain Family
Herpes_MCP
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pfam03122: Herpes_MCP (This model is not part of the current CDD release)
Herpes virus major capsid protein
This family represents the major capsid protein (MCP) of herpes viruses. The capsid shell consists of 150 MCP hexamers and 12 MCP pentamers. One pentamer is found at each of the 12 apices of the icosahedral shell, and the hexamers form the edges and 20 faces.
Links
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Statistics
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PSSM-Id: 515397
Aligned: 17 rows
Threshold Bit Score: 1863.22
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
6PPB_S   13 LATEANLLTQIKESAADGLFKSFQLLLGKDAReGSVRFEALLGVYTNVVEFVKFLETALAAACVNTEFKDLRRMIDGKIQ 92   Human herpesvirus 8...
O36375   14 AAVEANLLRQVKESAAEGLFKSFQLLVGKDVReNSVRFEVLLGVYANVIEFVKFLETGLAASCINTEFRDLKRMVDGKIQ 93   Alcelaphine herpesv...
F5HGT1   13 VGIPTDFLTHVKTSAGEEMFEALRIYYGDDPErYNIHFEAIFGTFCNRLEWVYFLTSGLAAAAHAIKFHDLNKLTTGKML 92   Human herpesvirus 5...
P17887   13 IEAPLNIFNDIKTYTAEQLFDNLRIYFGDDPSrYNISFEALLGIYCNKIEWINFFTTPIAVAANVIRFNDVSRMTLGKVL 92   Human herpesvirus 6...
P06491   17 MVPTGSLLSTIEVASHRRLFDFFSRVRSDANSlYDVEFDALLGSYCNTLSLVRFLELGLSVACVCTKFPELAYMNEGRVQ 96   Human alphaherpesvi...
P09245   29 IIPTGNVLSTIEVCAHRCIFDFFKQIRSDDNSlYSAQFDILLGTYCNTLNFVRFLELGLSVACICTKFPELAYVRDGVIQ 108  Human herpesvirus 3...
Q9E6P8   30 LAPTGRLLSTIEMSSHRCMFDYFKQFSSDDNGrYAAQFDLLLGTYCNTLSLIRFLETGLSVACVCTRAPDLMYMREGTVQ 109  Marek's disease her...
6LGL_A   29 IIPTGNVLSTIEVCAHRCIFDFFKQIRSDDNSlYSAQFDILLGTYCNTLNFVRFLELGLSVACICTKFPELAYVRDGVIQ 108  Varicella-zoster virus
6CGR_A   17 MVPTGSLLSTIEVASHRRLFDFFSRVRSDANSlYDVEFDALLGSYCNTLSLVRFLELGLSVACVCTKFPELAYMNEGRVQ 96   Herpes simplex viru...
8TEP_H   13 VGIPTDFLTHVKTSAGEEMFEALRIYYGDDPErYNIHFEAIFGTFCNRLEWVYFLTSGLAAAAHAIKFHDLNKLTTGKML 92   Human herpesvirus 5...

6PPB_S   93 FKISMPTIAHGDGRRPNKQRQYIVMKACNKHHIGAEIELAAADIELLFAE--KETPLDFTEYAGAIKTITSALQFGMDAL 170  Human herpesvirus 8...
O36375   94 FKVSVPTIAHSDGRRPNKQRQYIVMKCTSKHHISAEIELAIADLENMHME--PETDLDMLEYIGTVKTVTSALQFGIDAL 171  Alcelaphine herpesv...
F5HGT1   93 FHVQVPRVASGAGLPTSRQTTIMVTKYSEKSPITIPFELSAACLTYLRETf-EGTILDKILNVEAMHTVLRALKNTADAM 171  Human herpesvirus 5...
P17887   93 FFIQLPRVATGNDVTASKETTIMVAKHSEKHPINISFDLSAACLEHLENTf-KNTVIDQILNINALHTVLRSLKNSADSL 171  Human herpesvirus 6...
P06491   97 FEVHQPLIARDGPHPIEQPTHNYMTKIIDRRALNAAFSLATEAIALLTGEalDGTGIGAHRQLRAIQQLARNVQAVLGAF 176  Human alphaherpesvi...
P09245  109 FEVQQPMIARDGPHPVDQPVHNYMVKRIHKRSLSAAFAIASEALSLLSNTyvDGTEIDSSLRIRAIQQMARNLRTVLDSF 188  Human herpesvirus 3...
Q9E6P8  110 FEIQQPMIAREGPHPADQPIHTYMVKRLCRRSLSAAFVVAAEALALLSEVslDGTAISTHLRMRAIQQLARNVRTILDSF 189  Marek's disease her...
6LGL_A  109 FEVQQPMIARDGPHPVDQPVHNYMVKRIHKRSLSAAFAIASEALSLLSNTyvDGTEIDSSLRIRAIQQMARNLRTVLDSF 188  Varicella-zoster virus
6CGR_A   97 FEVHQPLIARDGPHPIEQPTHNYMTKIIDRRALNAAFSLATEAIALLTGEalDGTGIGAHRQLRAIQQLARNVQAVLGAF 176  Herpes simplex viru...
8TEP_H   93 FHVQVPRVASGAGLPTSRQTTIMVTKYSEKSPITIPFELSAACLTYLRETf-EGTILDKILNVEAMHTVLRALKNTADAM 171  Human herpesvirus 5...

6PPB_S  171 ERGLVDTVLAVKLRHAPPVFILKTLGD-PVYSERGLKKAVKSDMVSMFKAHLIEHSFFLDKAElmtRG---KQYVLTMLS 246  Human herpesvirus 8...
O36375  172 ERGLIDTVLSVKLRHAPPLFILQSLSD-PTLTERGLKKSIKSDLVSMFKDHLITHSFFINKAE---ALatpRQYILGMLS 247  Alcelaphine herpesv...
F5HGT1  172 ERGLIHSFLQTLLRKAPPYFVVQTLVEnATLARQALNRIQRSNILQSFKAKMLATLFLLNRTR---D----RDYVLKFLT 244  Human herpesvirus 5...
P17887  172 ERGLIHAFMQTLLRKSPPQFIVLTMNEnKVHNKQALSRVQRSNMFQSLKNRLLTSLFFLNRNN---N----ISYIYRILN 244  Human herpesvirus 6...
P06491  177 ERGTADQMLHVLLEKAPPLALLLPMQR-YLDNGRLATRVARATLVAELKRSFCETSFFLGKAG---HR---REAVEAWLV 249  Human alphaherpesvi...
P09245  189 ERGTADQLLGVLLEKAPPLSLLSPINK-FQPEGH-LNRVARAALLSDLKRRVCADMFFMTRHA---RE---PRLISAYLS 260  Human herpesvirus 3...
Q9E6P8  190 ERGTVDQMLRILLEKAPPAPLLIPLSR-SQAEGRIAGQVMRANLVSELKRTVRTESFIMNKTN---AN---RDTIISFLT 262  Marek's disease her...
6LGL_A  189 ERGTADQLLGVLLEKAPPLSLLSPINK-FQPEGH-LNRVARAALLSDLKRRVCADMFFMTRHA---RE---PRLISAYLS 260  Varicella-zoster virus
6CGR_A  177 ERGTADQMLHVLLEKAPPLALLLPMQR-YLDNGRLATRVARATLVAELKRSFCETSFFLGKAG---HR---REAVEAWLV 249  Herpes simplex viru...
8TEP_H  172 ERGLIHSFLQTLLRKAPPYFVVQTLVEnATLARQALNRIQRSNILQSFKAKMLATLFLLNRTR---D----RDYVLKFLT 244  Human herpesvirus 5...

6PPB_S  247 DMLAAVcEDTVFKGVSTYTTASGQQVAGVLETTDSVMrRLMNLLGQ-VESA-MSGPAAYASYVVRGANLVTAVSYGRAMR 324  Human herpesvirus 8...
O36375  248 SIINSVsKETVFKGTSTYTTSSGEPVAGVIETTDAILnKLLTLLGe-YKTE-VVGPAAYASYVVRGENLVTAVSYGRAMR 325  Alcelaphine herpesv...
F5HGT1  245 RLAEAA-TDSILDNPTTYTTSSGAKISGVMVSTANVMqIIMSLLSShITKEtVSAPATYGNFVLSPENAVTAISYHSILA 323  Human herpesvirus 5...
P17887  245 DMMESV-TESILNDTNNYTSKENVPLDGVLLGPIGSIqKLTSILSQyISTQvVSAPISYGHFIMGKENAVTAIAYRAIMA 323  Human herpesvirus 6...
P06491  250 DLTTAT-QPSVAVPRLTHADTRGRPVDGVLVTTAPIKqRLLQSFLKvEDTE-ADVPVTYGEMVLNGANLVTALVMGKAVR 327  Human alphaherpesvi...
P09245  261 DMVSCT-QPSVMVSRITHTNTRGRQVDGVLVTTATLKrQLLQGILQiDDTA-ADVPVTYGEMVLQGTNLVTALVMGKAVR 338  Human herpesvirus 3...
Q9E6P8  263 KMVNCT-HQTISMPRLTHSDSKGRLVDGVLVTTTMVRqKLLSGILDvVDTS-ARVPVTYGEMIISGTNLVTAVVMGKAVR 340  Marek's disease her...
6LGL_A  261 DMVSCT-QPSVMVSRITHTNTRGRQVDGVLVTTATLKrQLLQGILQiDDTA-ADVPVTYGEMVLQGTNLVTALVMGKAVR 338  Varicella-zoster virus
6CGR_A  250 DLTTAT-QPSVAVPRLTHADTRGRPVDGVLVTTAPIKqRLLQSFLKvEDTE-ADVPVTYGEMVLNGANLVTALVMGKAVR 327  Herpes simplex viru...
8TEP_H  245 RLAEAA-TDSILDNPTTYTTSSGAKISGVMVSTANVMqIIMSLLSShITKEtVSAPATYGNFVLSPENAVTAISYHSILA 323  Human herpesvirus 5...

6PPB_S  325 NFEQFMARIVDHPNalP---SV----EGDKAAl--ADGHDEIQRTRIAASLVKIGDKFVAIESLQ-R-MYNETQFPCPLN 393  Human herpesvirus 8...
O36375  326 SFEQFKNKLVDDPV--GqagSL----DKNad---sDNEYSSLPQTTIPVSVVKVGSQPVIVESIQ-K-MYNEAQAPFPLN 394  Alcelaphine herpesv...
F5HGT1  324 DFNSYKAHLTS---------------GQPHLPndsLSQAGAHSLTPLSMDVIRLGEKTVIMENLR-R-VYKNTDTKDPLE 386  Human herpesvirus 5...
P17887  324 DFTQFTVNAGT---------------EQQDTNnksEIFDKSRAYADLKLNTLKLGDKLVAFDHLH-K-VYKNTDVNDPLE 386  Human herpesvirus 6...
P06491  328 SLDDVGRHLLEMQE--E---------QLDLNRqtlDELESAPQTTRVRADLVSIGEKLVFLEALEkR-IYAATNVPYPLV 395  Human alphaherpesvi...
P09245  339 GMDDVARHLLDITD--PntlNIp---SIPPQSnsdSTTAGLPVNARVPADLVIVGDKLVFLEALErR-VYQATRVAYPLI 412  Human herpesvirus 3...
Q9E6P8  341 NMDDIARYILNLKE--Dn--------IIDRTDeivRGDDDRPQTAEISAELVTIGDKLIFLESMErR-VYQATQVQYPLI 409  Marek's disease her...
6LGL_A  339 GMDDVARHLLDITD--P---NTlnipSIPPQSnsdSTTAGLPVNARVPADLVIVGDKLVFLEALE-RrVYQATRVAYPLI 412  Varicella-zoster virus
6CGR_A  328 SLDDVGRHLLEMQE--E---------QLDLNRqtlDELESAPQTTRVRADLVSIGEKLVFLEALEkR-IYAATNVPYPLV 395  Herpes simplex viru...
8TEP_H  324 DFNSYKAHLTS---------------GQPHLPndsLSQAGAHSLTPLSMDVIRLGEKTVIMENLR-R-VYKNTDTKDPLE 386  Human herpesvirus 5...

6PPB_S  394 RRIQYTYFFPVGLHLPv--PRYST-SVSVR-----GVESPAIQ-STETWVVNKNNVPLCFGYQNALKSICHPRMHNPTQS 464  Human herpesvirus 8...
O36375  395 RRMQYTYFFPLGLFIPr--PKYTT-STSVK-----LEDDSCL--SSEVWVVNKTNTPLCFNYQNALRTLCHPRVNSPSAC 464  Alcelaphine herpesv...
F5HGT1  387 RNVDLTFFFPVGLYLPe-dRGYTTvESKVK-----LNDTVRNAlPTTAYLLNRDRAVQKIDFVDALKTLCHPVLHEPAPC 460  Human herpesvirus 5...
P17887  387 QSLQLTFFFPLGIYIPs-eTGFSTmETRVK-----LNDTMENNlPTSVFFHNKDQVVQRIDFADILPSVCHPIVHDSTIV 460  Human herpesvirus 6...
P06491  396 GAMDLTFVLPLGLFNPv-mERFAAhAGDLVpa--pGHPDPRAFpPRQLFFWGKDRQVLRLSLEHAIGTVCHPSLMNVDAA 472  Human alphaherpesvi...
P09245  413 GNIDITFIMPMGVFQAnsmDRYTRhAGDFSt---vSEQDPRQFpPQGIFFYNKDGILTQLTLRDAMGTICHSSLLDVEAT 489  Human herpesvirus 3...
Q9E6P8  410 GHVDLTFIMPLGIYQKr-gDRYARhIGDYApgpgcNVGDIRIFpPREIYFYNKDNQVISLSLSDAIGTLCHSSFLDVEAT 488  Marek's disease her...
6LGL_A  413 GNIDITFIMPMGVFQAnsmDRYTRhAGDFSt---vSEQDPRQFpPQGIFFYNKDGILTQLTLRDAMGTICHSSLLDVEAT 489  Varicella-zoster virus
6CGR_A  396 GAMDLTFVLPLGLFNPv-mERFAAhAGDLVpa--pGHPDPRAFpPRQLFFWGKDRQVLRLSLEHAIGTVCHPSLMNVDAA 472  Herpes simplex viru...
8TEP_H  387 RNVDLTFFFPVGLYLPe-dRGYTTvESKVK-----LNDTVRNAlPTTAYLLNRDRAVQKIDFVDALKTLCHPVLHEPAPC 460  Human herpesvirus 5...

6PPB_S  465 AQALNq---------AFPD-PDGGHGYGLRYEQTPNMNLFRTFHQYYMGKNVAFVP---D--VAQKALVTTEDLLHPTSh 529  Human herpesvirus 8...
O36375  465 LQELQrsnladnaleAFRD--------GLRSRPMDNMNLFAHVRRFYLKRTEVVLL---P--IAQKCNLSTDDLLHPTNh 531  Alcelaphine herpesv...
F5HGT1  461 LQTFTe--------rGPPSePAMQRLLECRFQQEPMGGAARRIPHFYRVRREVPRT---V--NEMKQDFVVTDFYKVGN- 526  Human herpesvirus 5...
P17887  461 ERLMKs--------ePLPTgHRFSQLCQLKITRENPARILQTLYNLYESRQEVPKN---T--NVLKNELNIEDFYKPDN- 526  Human herpesvirus 6...
P06491  473 VGGLN------------RDpVEAANPYGAYVA-APAGPAADMQQLFLNAWGQRLAHgrvR--WVAEGQMTPEQFMQPDN- 536  Human alphaherpesvi...
P09245  490 LVALR------------QQhLDRQCYFGVYVAEGTEDTLDVQMGRFMETWADMMPHh-pH--WVNE-HLTILQFIAPSN- 552  Human herpesvirus 3...
Q9E6P8  489 VGNLR------------NGkYTLSCVLGAYVTNPPALPLADASRQFFENIGEFLRDp-pR--WIDECHMTVEQFLSTGN- 552  Marek's disease her...
6LGL_A  490 LVALRq------------QhLDRQCYFGVYVAEGTEDTLDVQMGRFMETWADMMPH---HphWVNE-HLTILQFIAPSN- 552  Varicella-zoster virus
6CGR_A  473 VGGLN------------RDpVEAANPYGAYVA-APAGPAADMQQLFLNAWGQRLAHgrvR--WVAEGQMTPEQFMQPDN- 536  Herpes simplex viru...
8TEP_H  461 LQTFTe--------rGPPSePAMQRLLECRFQQEPMGGAARRIPHFYRVRREVPRT---V--NEMKQDFVVTDFYKVGN- 526  Human herpesvirus 5...

6PPB_S  530 RLLRLEVHPFFDFFVHPC---------PGARG-SYRATHRTMVGNIPQPLAPREFQESRGAQFdavTNMTHV------ID 593  Human herpesvirus 8...
O36375  532 KLLQLELHPLFDFVVERV---------AAEEA-AFRATHRTFSGNIPQPLAPNQFQDSRGKQFeaaTSLQHA------VD 595  Alcelaphine herpesv...
F5HGT1  527 ITLYTELHPFFDFTHC-----------QENSEtVALCTPRIVIGNLPDGLAPGPFHELRTWEI-----MEHMrlrpppDY 590  Human herpesvirus 5...
P17887  527 PTLPTERHPFFDLTYI-----------QKNRAtEVLCTPRIMIGNIPLPLAPVSFHEARTNQI-----LEHAktn-cqNY 589  Human herpesvirus 6...
P06491  537 ANLALELHPAFDFFVGVAdvelpggdvPPAGPgEIQATWRVVNGNLPLALCPAAFRDARGLEL---GVGRHA------MA 607  Human alphaherpesvi...
P09245  553 PRLRFELNPAFDFFVAPGdvdlpgpqrPPEAMpTVNATLRIINGNIPVPLCPISFRDCRGTQL---GLGRHT------MT 623  Human herpesvirus 3...
Q9E6P8  553 PYLSMELHPAFDFFVVPGdvdlpgphnVPQVMaSISASLRVCNCNIPLPLCNSDFRDALGQEL---ASTHHK------MS 623  Marek's disease her...
6LGL_A  553 PRLRFELNPAFDFFVAPGdvdlpgpqrPPEAMpTVNATLRIINGNIPVPLCPISFRDCRGTQL---GLGRHT------MT 623  Varicella-zoster virus
6CGR_A  537 ANLALELHPAFDFFVGVAdvelpggdvPPAGPgEIQATWRVVNGNLPLALCPAAFRDARGLEL---GVGRHA------MA 607  Herpes simplex viru...
8TEP_H  527 ITLYTELHPFFDFTHC-----------QENSEtVALCTPRIVIGNLPDGLAPGPFHELRTWEI-----MEHMrlrpppDY 590  Human herpesvirus 5...

6PPB_S  594 QLTIDVIQETAFDPAYPLFCYVIEAMIHGQEEKFVMNMPLIALVIQTYWVNSGKLAFVNSYHMVRFICTHMGnGSIPKEA 673  Human herpesvirus 8...
O36375  596 DATLEVIRSTAFDPTYPFICYIVEAMIHGQPEKFTMNIPFISLCINTYWDNSGNLAFINSFFMVKNICTHMGgGLINRDA 675  Alcelaphine herpesv...
F5HGT1  591 EETLRLFKTTVTSPNYPELCYLVDVLVHGNVDAFLLIRTFVARCIVNMFHTRQLLVFAHSYALVTLIAEHLAdGALPPQL 670  Human herpesvirus 5...
P17887  590 DFTLKIVTESLTSGSYPELAYVIETLVHGNKHAFMILKQVISQCISYWFNMKHILLFCNSFEMIMLISNHMGdELIPGAA 669  Human herpesvirus 6...
P06491  608 PATIAAVRGAFDDRNYPAVFYLLQAAIHGSEHVFCALARLVVQCITSYWNNTRCAAFVNDYSLVSYVVTYLG-GDLPEEC 686  Human alphaherpesvi...
P09245  624 PATIKAVKDTFEDRAYPTIFYMLEAVIHGNERNFCALLRLLTQCIRGYWEQSHRVAFVNNFHMLMYITTYLGnGELPEVC 703  Human herpesvirus 3...
Q9E6P8  624 DATINAVSATFSDISYPTAFYIIEAVIHGSERNFGLLMRLVIQCIRSYWDNCKRVAFVNNFHMVAFIDTYLCsGELPEEC 703  Marek's disease her...
6LGL_A  624 PATIKAVKDTFEDRAYPTIFYMLEAVIHGNERNFCALLRLLTQCIRGYWEQSHRVAFVNNFHMLMYITTYLGnGELPEVC 703  Varicella-zoster virus
6CGR_A  608 PATIAAVRGAFDDRNYPAVFYLLQAAIHGSEHVFCALARLVVQCITSYWNNTRCAAFVNDYSLVSYVVTYLG-GDLPEEC 686  Herpes simplex viru...
8TEP_H  591 EETLRLFKTTVTSPNYPELCYLVDVLVHGNVDAFLLIRTFVARCIVNMFHTRQLLVFAHSYALVTLIAEHLAdGALPPQL 670  Human herpesvirus 5...

6PPB_S  674 HGHYRKILGELIALEQALLKLA-GHETVGRTPITHLVSALLDPHLLPPFAYhdvftd--lmqksSRQPIIKIGDQNYDNP 750  Human herpesvirus 8...
O36375  676 YALYRKILGEVVAIKHAIVRMC-GAEQLGNNELQGYVNGLLDRQLLPPFAYrdtf-----aqldNRGARFVIGAKEHDNS 749  Alcelaphine herpesv...
F5HGT1  671 LFHYRNLVAVLRLVTRISALPGlNNGQLAEEPLSAYVNALHDHRLWPPFVThlprnmegvqvvaDRQPLNPANIEARHHG 750  Human herpesvirus 5...
P17887  670 FAHYRNLVSLIRLVKRTISISNl-NEQLCGEPLVNFANALFDGRLFCPFVHtmprndtnakitaDDTPLTQNTVRVRNYE 748  Human herpesvirus 6...
P06491  687 MAVYRDLVAHVEALAQLVDDFTlTGPELGGQAQAELNHLMRDPALLPPLVW-------------DCDALMRRAALDRHRD 753  Human alphaherpesvi...
P09245  704 INIYRDLLQHVRALRQTITDFTiQGEGHNGETSEALNNILTDDTFIAPILW-------------DCDALIYRDEAARDRL 770  Human herpesvirus 3...
Q9E6P8  704 TNVYKDLMHHVRALRSIVRNYTvQTDPLYGQSHEELNHVLIDRTILPPLLW-------------DCDPLIYQAEGMRDRD 770  Marek's disease her...
6LGL_A  704 INIYRDLLQHVRALRQTITDFTiQGEGHNGETSEALNNILTDDTFIAPILW-------------DCDALIYRDEAARDRL 770  Varicella-zoster virus
6CGR_A  687 MAVYRDLVAHVEALAQLVDDFTlTGPELGGQAQAELNHLMRDPALLPPLVW-------------DCDALMRRAALDRHRD 753  Herpes simplex viru...
8TEP_H  671 LFHYRNLVAVLRLVTRISALPGlNNGQLAEEPLSAYVNALHDHRLWPPFVThlprnmegvqvvaDRQPLNPANIEARHHG 750  Human herpesvirus 5...

6PPB_S  751 QnratFINLRGRMEDLVNNLVNiyQTRVNEDHDERHVLDVAPLDEND------YN------------PVLEKLFYYVLMP 812  Human herpesvirus 8...
O36375  750 Qa---FVHALPDFENANQVAPAmyHTRNTFNWDTFEYITVSNGNNDA------DA------------ADLEKIYYYVMLP 808  Alcelaphine herpesv...
F5HGT1  751 VsdvpRLGAMDADEPL--------------------------FVDDY------RAtd--------deWTLQKVFYLCLMP 790  Human herpesvirus 5...
P17887  749 IsdvqRMNLIDS---------------------------SVVFTDND------RPsn--------etTILSKIFYFCVLP 787  Human herpesvirus 6...
P06491  754 C----RVSAGGH-DPVYAAAc--nVATADFNRNDGQLLHNTQARAAD------AAddrph--rgadwTVHHKIYYYVMVP 818  Human alphaherpesvi...
P09245  771 P----AIRVSGR--NGYQALHFvdMAGHNFQRRDNVLIHGRPVRGDT------GQgipitphhdrewGILSKIYYYIVIP 838  Human herpesvirus 3...
Q9E6P8  771 L----YLNVGSE--NNYAVRPWleLQDADFQRTGNVLIHNRPIRDAD------RQtfvph--haqewTTLSKIYYYVMVP 836  Marek's disease her...
6LGL_A  771 Pa----IRVSGR--NGYQALHFvdMAGHNFQRRDNVLIHGRPVRGDT------GQgipitphhdrewGILSKIYYYIVIP 838  Varicella-zoster virus
6CGR_A  754 C----RVSAGGH-DPVYAAACNv--ATADFNRNDGQLLHNTQARAADaaddrpHRga--------dwTVHHKIYYYVMVP 818  Herpes simplex viru...
8TEP_H  751 VsdvpRLGAMDADEPL--------------------------FVDDY------RAtd--------deWTLQKVFYLCLMP 790  Human herpesvirus 5...

6PPB_S  813 VCSNGHMCGMGVDYQNVALTL-TYNGPVFADV------------------VNAQDDILLHLENGTLKDIl---------q 864  Human herpesvirus 8...
O36375  809 VCTNGHMCGMGADFENIAIVL-GYNIPVFDIPq-----------------FNGDDTVLEHLENGPLRDIl---------i 861  Alcelaphine herpesv...
F5HGT1  791 AMTNNRACGLGLNLKTLLVDL-FYRPAFLLMPaatavstsgttskestsgVTPEDSIAA--QRQAVGEMltelvedvatd 867  Human herpesvirus 5...
P17887  788 ALSNNKACGAGVNVKELVLDL-FYTEPF----------------------ISPDDYFQ---ENPITSDVlmsliregmgp 841  Human herpesvirus 6...
P06491  819 AFSRGRCCTAGVRFDRVYATLqNMVVPEIAPGeecpsdpvtdpahplhpaNLVANTVNAMFHNGRVVV------------ 886  Human alphaherpesvi...
P09245  839 AFSRGSCCTMGVRYDRLYPALqAVIVPEIPADeeapttped-prhplhahQLVPNSLNVYFHNAHLTV------------ 905  Human herpesvirus 3...
Q9E6P8  837 SFSRGQCCTMGIRFDNIYATSqSVIIPDLQPDeepplgped-prhplngrNLVPNTFNVMLHNARISV------------ 903  Marek's disease her...
6LGL_A  839 AFSRGSCCTMGVRYDRLYPALqAVIVPEIPADeeapttped-prhplhahQLVPNSLNVYFHNAHLTV------------ 905  Varicella-zoster virus
6CGR_A  819 AFSRGRCCTAGVRFDRVYATLqNMVVPEIAPGeecpsdpvtdpahplhpaNLVANTVNAMFHNGRVVV------------ 886  Herpes simplex viru...
8TEP_H  791 AMTNNRACGLGLNLKTLLVDL-FYRPAFLLMPaatavstsgttskestsgVTPEDSIAA--QRQAVGEMltelvedvatd 867  Human herpesvirus 5...

6PPB_S  865 AGDIRPTVDMIRVLCTSFLTCPfvtqaARVITKRDPAQSFAThEYGKDVAQTVLVNGFGAFAVADRSRE-AAETMFYPVP 943  Human herpesvirus 8...
O36375  862 ASEVNPTADMLRMMIVSYLNCPqmtqvVRVKTRRDHCQNLGP-EQGAIIEHTVMVNGFVCFGIPERMKQ-VAKNMFYPVP 939  Alcelaphine herpesv...
F5HGT1  868 AHTPLLQAC--RELFLAVQFVGehvkvLEVRAPLDHAQRQG--LPDFISRQHVLYNGCCVVTAPKTLIE-----YSLPVP 938  Human herpesvirus 5...
P17887  842 GYTVANTSCIAKQLFKSLIYINentkiLEVEVSLDPAQRHGN-SVHFQSLQHILYNGLCLISPITTLRR-----YYQPIP 915  Human herpesvirus 6...
P06491  887 DGPAMLT------LQVLAHNMAerttaLLCSAAPDAGANTAS-TTNMRIFDGALHAGILLMAPQHLDHTiQNGDYFYPLP 959  Human alphaherpesvi...
P09245  906 DGDALLT------LQELMGDMAerttaILVSSAPDAGAATAT-TRNMRIYDGALYHGLIMMAYQAYDETiATGTFFYPVP 978  Human herpesvirus 3...
Q9E6P8  904 DADALLT------LQETVNNMAerttaILYGSTPDIGSSSSS-TRHMRTFDGALHHGLLMMAYPCNDETvAAGTYFYPVP 976  Marek's disease her...
6LGL_A  906 DGDALLT------LQELMGDMAerttaILVSSAPDAGAATAT-TRNMRIYDGALYHGLIMMAYQAYDETiATGTFFYPVP 978  Varicella-zoster virus
6CGR_A  887 DGPAMLT------LQVLAHNMAerttaLLCSAAPDAGANTAS-TTNMRIFDGALHAGILLMAPQHLDHTiQNGDYFYPLP 959  Herpes simplex viru...
8TEP_H  868 AHTPLLQAC--RELFLAVQFVGehvkvLEVRAPLDHAQRQG--LPDFISRQHVLYNGCCVVTAPKTLIE-----YSLPVP 938  Human herpesvirus 5...

6PPB_S  944 FNKLYADPLVAATL---H---P---LLANYVTRLPNqrna-vvfnVPSNLMAEYEEWHKSPVAAYAASCQATPGAIS-AM 1012 Human herpesvirus 8...
O36375  940 FHRFYCDPLVAGSW---D---N---HIQNYVMNNFSqrsl-eafnAPPGIMADYAEWHKAPMAKYITSCKASTASLS-AF 1008 Alcelaphine herpesv...
F5HGT1  939 FHRFYSNPTICAAL---S---D---DIKRYVTEFPHyhrhdggfpLPTAFAHEYHNWLRSPFSRYSATCPNVLHSVM-TL 1008 Human herpesvirus 5...
P17887  916 FHRFFSDPGICGTM---N---A---DIQVFLNTFPHcqrndggfpLPPPLALEFYNWQRTPFSVYSAFCPNSLLSIM-TL 985  Human herpesvirus 6...
P06491  960 VHALFAGADHVANA---P---NfppALRDLSRQVPL---------VPPALGANYFSSIRQPVVQHVRESAAGENALTyAL 1024 Human alphaherpesvi...
P09245  979 VNPLFACPEHLASL---R---GmtnARRVLAKMVPP---------IPPFLGANHHATIRQPVAYHVTHSKSDFNTLTySL 1043 Human herpesvirus 3...
Q9E6P8  977 VNALFACHDHLAAV---R---DlpgNSRTLLYRAPP---------VPPFLGANYYSTFRQPVAQYVKESRCGPNEISyAL 1041 Marek's disease her...
6LGL_A  979 VNPLFACPEHLASL---RgmtN---ARRVLAKMVPp---------IPPFLGANHHATIRQPVAYHVTHSKSDFNTLTySL 1043 Varicella-zoster virus
6CGR_A  960 VHALFAGADHVANApnfP---P---ALRDLSRQVPL---------VPPALGANYFSSIRQPVVQHVRESAAGENALTyAL 1024 Herpes simplex viru...
8TEP_H  939 FHRFYSNPTICAAL---S---D---DIKRYVTEFPHyhrhdggfpLPTAFAHEYHNWLRSPFSRYSATCPNVLHSVM-TL 1008 Human herpesvirus 5...

6PPB_S 1013 VSMHQKLSAPSFICQAKHRMHPGFAMTVVRTDEVLAEHILYCSRASTSMFVGLPSVVRREvRSDAVTFEITHEIASLHTA 1092 Human herpesvirus 8...
O36375 1009 TVMHNKLSPIAFIVQAKHKIHPGFALTVLRTDEVLAENVMFSARASTSVFVGRPTVSRREvRADAVSFEVNHELATIETG 1088 Alcelaphine herpesv...
F5HGT1 1009 AAMLYKISPVSLVLQTKAHIHPGFALTAVRTDTFEVDMLLYSGKSCTSVIINNPIVTKEE-RDISTTYHVTQNINTVDMG 1087 Human herpesvirus 5...
P17887  986 AAMHSKLSPVAIAIQSKNKIHPGFAATLVRTDNFDVECLLYSSRAATSIILDDPTVTAEA-KDIATTYNFTQHLSFVDMG 1064 Human herpesvirus 6...
P06491 1025 MAGYFKISPVALHHQLKTGLHPGFGFTVVRQDRFVTENVLFSERASEAYFLGQLQVARHE-TGGGVNFTLTQPRANVDLG 1103 Human alphaherpesvi...
P09245 1044 LGGYFKFTPISLTHQLRTGFHPGIAFTVVRQDRFATEQLLYAERASESYFVGQIQVHHHD-AIGGVNFTLTQPRAHVDLG 1122 Human herpesvirus 3...
Q9E6P8 1042 MAGYFKLSPIGLYHQLRTGLHPGIAFTVIRQDRFLADMGLFAERASESYFLGQVSVTKRP-HAGGVQFSLTQPRANVDLG 1120 Marek's disease her...
6LGL_A 1044 LGGYFKFTPISLTHQLRTGFHPGIAFTVVRQDRFATEQLLYAERASESYFVGQIQVHHHD-AIGGVNFTLTQPRAHVDLG 1122 Varicella-zoster virus
6CGR_A 1025 MAGYFKISPVALHHQLKTGLHPGFGFTVVRQDRFVTENVLFSERASEAYFLGQLQVARHE-TGGGVNFTLTQPRGNVDLG 1103 Herpes simplex viru...
8TEP_H 1009 AAMLYKISPVSLVLQTKAHIHPGFALTAVRTDTFEVDMLLYSGKSCTSVIINNPIVTKEE-RDISTTYHVTQNINTVDMG 1087 Human herpesvirus 5...

6PPB_S 1093 LGYSSVIAPAHVAAITTDMGVHCQDLFMIFPGDAYQDRQLHDYIKMKAGVQT-GpPGNRMDHVGYAAGVPRCENLPGLSH 1171 Human herpesvirus 8...
O36375 1089 LSYSSVVTPAHVASITTDMGIYCQNLFSIFSNEIYDHADVNNYVARKIGVED---AVNRHNPRALIAGVGQISHPPGLVH 1165 Alcelaphine herpesv...
F5HGT1 1088 LGYTSNTCVAYVNRVRTDMGVRVQDLFRVFPMNVYRHDEVDRWIRHAAGVERpQ-LLDTETISMLTFGSMSERNAAATVH 1166 Human herpesvirus 5...
P17887 1065 LGFSSTTATANLKRIKSDMGSKIQNLFSAFPIHAFTNADINTWIRHHVGIEKpN-PSESEALNIITFGGINKNPPSILLH 1143 Human herpesvirus 6...
P06491 1104 VGYTAVVATATVRNPVTDMGNLPQNFYLGRGAPPLLDNAAAVYLRNAVVAGN----RLGPAQPVPVFGCAQVPRRAGMDH 1179 Human alphaherpesvi...
P09245 1123 VGYTAVCATAALRCPLTDMGNTAQNLFFSRGGVPMLHDNVTESLRRITASGG----RLNPTEPLPIFGGLRPATSAGIAR 1198 Human herpesvirus 3...
Q9E6P8 1121 VGYTATCTPLLLRNAITDMGNTVQSLHLTRGSPPLLHQEADEFLRKVTTRGQ----RAAPQRTVPFLGTLMPNLPSGLEH 1196 Marek's disease her...
6LGL_A 1123 VGYTAVCATAALRCPLTDMGNTAQNLFFSRGGVPMLHDNVTESLRRITASG----GRLNPTEPLPIFGGLRPATSAGIAR 1198 Varicella-zoster virus
6CGR_A 1104 VGYTAVVATATVRNPVTDMGNLPQNFYLGRGAPPLLDNAAAVYLRNAVVAGN----RLGPAQPVPVFGCAQVPRRAGMDH 1179 Herpes simplex viru...
8TEP_H 1088 LGYTSNTCVAYVNRVRTDMGVRVQDLFRVFPMNVYRHDEVDRWIRHAAGVERpQ-LLDTETISMLTFGSMSERNAAATVH 1166 Human herpesvirus 5...

6PPB_S 1172 GQLATCEIIPTPVTSDVAYFQTPSNPRGRAACVVSCDAySNESAERLLYDHSIPDPAYECRSTNNPWASQRGSLGDVLYN 1251 Human herpesvirus 8...
O36375 1166 GQYATCEVIPTPVTADVAYFQKSNSPRGRASCVVSSDInNQERAEQFLYDHSLPDPAYEYRSTVNPWASQKGSLGDVLYG 1245 Alcelaphine herpesv...
F5HGT1 1167 GQKAACELILTPVTMDVNYFKIPNNPRGRASCMLAVDPyDTEAATKAIYDHREAD-AQTFAATHNPWASQAGCLSDVLYN 1245 Human herpesvirus 5...
P17887 1144 GQQAICEVILTPVTTNINFFKSPHNPRGRESCMMGTDPhNEEAARKALYDHTQTD-SDTFAATTNPWASLPGSLGDILYN 1222 Human herpesvirus 6...
P06491 1180 GQDAVCEFIATPVSTDVNYFRRPCNPRGRAAGGVYAGD-KEGDVTALMYDHGQSDPSRAFAATANPWASQRFSYGDLLYN 1258 Human alphaherpesvi...
P09245 1199 GQASVCEFVAMPVSTDLQYFRTACNPRGRASGMLYMGD-RDADIEAIMFDHTQSDVAYTDRATLNPWASQKHSYGDRLYN 1277 Human herpesvirus 3...
Q9E6P8 1197 GQMSICEFIPTPVSADLEYFRTPCNPRGRAAGAIHSGE-EASDIDDVMYDHQQGDPAYPFRATNNPWASQRLSYADKLYN 1275 Marek's disease her...
6LGL_A 1199 GQASVCEFVAMPVSTDLQYFRTACNPRGRASGMLYMGD-RDADIEAIMFDHTQSDVAYTDRATLNPWASQKHSYGDRLYN 1277 Varicella-zoster virus
6CGR_A 1180 GQDAVCEFIATPVSTDVNYFRRPCNPRGRAAGGVYAGD-KEGDVTALMYDHGQSDPSRAFAATANPWASQRFSYGDLLYN 1258 Herpes simplex viru...
8TEP_H 1167 GQKAACELILTPVTMDVNYFKIPNNPRGRASCMLAVDPyDTEAATKAIYDHREAD-AQTFAATHNPWASQAGCLSDVLYN 1245 Human herpesvirus 5...

6PPB_S 1252 ITFRQTAL--PGMYSPCRQFFHKEDIMRYNRGLYTLVNEYSArlAGAPATSTTDLQYVVVNGTDVFLDQPCHMLQEAYPT 1329 Human herpesvirus 8...
O36375 1246 SRYRQVSS--PGIYSPSKPFFNKEEMLKNNRSFYTLVNEYAQrlAGYAATSCTDLQYVVINGTDVFLEQPCLFLQEAFPT 1323 Alcelaphine herpesv...
F5HGT1 1246 TRHRERLGynSKFYSPCAQYFNTEEIIAANKTLFKTIDEYLLr-AKDCIRGDTDTQYVCVEGTEQLIENPCRLTQEALPI 1324 Human herpesvirus 5...
P17887 1223 TAHREQLCynPKTYSPNAQFFTESDILKTNKMMYKVISEYCMk-SNSCLNSDSEIQYSCSEGTDSFVSRPCQFLQNALPL 1301 Human herpesvirus 6...
P06491 1259 GAYHLNGA--SPVLSPCFKFFTSADIAAKHRCLERLIVETGS--AVSTATAASDVQFKRPPGCRELVEDPCGLFQEAYPL 1334 Human alphaherpesvi...
P09245 1278 GTYNLTGA--SPIYSPCFKFFTPAEVNTNCNTLDRLLMEAKA--VASQSSTDTEYQFKRPPGSTEMTQDPCGLFQEAYPP 1353 Human herpesvirus 3...
Q9E6P8 1276 GVYNLSGA--SPLFSPTYKFFTPAEVCCKTRCLDKLIGEAGS--ALASFASDGEVQFKRPIGSTELTEDPCSLFQEAYPI 1351 Marek's disease her...
6LGL_A 1278 GTYNLTGA--SPIYSPCFKFFTPAEVNTNCNTLDRLLMEAKAv-A-SQSSTDTEYQFKRPPGSTEMTQDPCGLFQEAYPP 1353 Varicella-zoster virus
6CGR_A 1259 GAYHLNGA--SPVLSPCFKFFTSADIAAKHRCLERLIVETGS--AVSTATAASDVQFKRPPGCRELVEDPCGLFQEAYPL 1334 Herpes simplex viru...
8TEP_H 1246 TRHRERLGynSKFYSPCAQYFNTEEIIAANKTLFKTIDEYLLr-AKDCIRGDTDTQYVCVEGTEQLIENPCRLTQEALPI 1324 Human herpesvirus 5...

6PPB_S 1330 LAASHRVMLDEYM---SNKQTHAPVHMGQYLIEEVAPMKRLL 1368 Human herpesvirus 8 strain GK18
O36375 1324 LSASHRVLLDEYM---SFKNTHAPVHMGHYFIEEVAPVKRVF 1362 Alcelaphine herpesvirus 1 strain C500
F5HGT1 1325 LSTTTLALMETKLkggAGAFATSETHFGNYVVGEIIPLQQSM 1366 Human herpesvirus 5 strain Merlin
P17887 1302 HCSSNQALLESRSk--TGNTQISETHYCNYAIGETIPFQLII 1341 Human herpesvirus 6 (strain Uganda-1102)
P06491 1335 TCASDPALLRSAR---NGEAHARETHFAQYLVYDASPLKGLa 1373 Human alphaherpesvirus 1 strain 17
P09245 1354 LCSSDAAMLRTAH---AGETGADEVHLAQYLIRDASPLRGCL 1392 Human herpesvirus 3 strain Dumas
Q9E6P8 1352 LCATDKALLRAYS---TGTTDNPETHLAQYLIRDASPIGGCL 1390 Marek's disease herpesvirus type 1 strain MD5
6LGL_A 1354 LCSSDAAMLRTAH---AGETGADEVHLAQYLIRDASPLRGCL 1392 Varicella-zoster virus
6CGR_A 1335 TCASDPALLRSAR---NGEAHARETHFAQYLVYDASPLKGLa 1373 Herpes simplex virus type 1
8TEP_H 1325 LSTTTLALMETKLkggAGAFATSETHFGNYVVGEIIPLQQSM 1366 Human herpesvirus 5 strain AD169
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