1V9P,8AK4


Conserved Protein Domain Family
DNA_ligase_OB

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pfam03120: DNA_ligase_OB (This model is not part of the current CDD release)
NAD-dependent DNA ligase OB-fold domain
DNA ligases catalyze the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilising either ATP or NAD(+) as a cofactor. This family is a small domain found after the adenylation domain pfam01653 in NAD dependent ligases. OB-fold domains generally are involved in nucleic acid binding.
Statistics
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PSSM-Id: 515396
Aligned: 392 rows
Threshold Bit Score: 80.8654
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1V9P_A                 322 ETRLLDVVFQVGRTGRVTPVGVLEPVFIEGSEVSRVTLHNESYIEELDIRIGDWVLVHKAGGVIPEVLRVLKERR-TGEE 400 Therm...
WP_006930949           320 ETLLEKITWQVGRTGIVTPVAELKPVQLAGTTVSRATLHNVDEIRRKDIRERDWVFIEKGGDIIPKVVGVNLKKR-PKDS 398 Caldi...
jgi:Caka_1148          366 ETLLKEISLQIGRTGAVTPVAILEPVQLAGTTVSRATLHNEDEIRRKDIRPGDTVLVQKAGEIIPQVLGVNISKR-PADS 444
B2UL69                 366 ETTLLNIVVQVGRTGVLTPVAELQPVLLSGSTVARATLHNQDEIDRKDVRIGDTVLVEKAGEIIPAVLKVNLSKR-PQDA 444 Akker...
PRJNA63271:OPIT5_13635 417 ETRINAITIQVGRTGVLTPVAELDPVLLAGTTVKRATLHNADEIARKDVRIGDTVLIEKAGEIIPAVIGVVMDKRiPSCE 496
B1ZWH2                 326 ETQLRAITVQVGRTGVLTPVAELDPVQLAGTTVSRATLHNRDEIARKDIRVGDFVYVEKAGEIIPAVIGVNPARR-APEC 404 Opitu...
O84148                 316 ETILEDIVVQVGKTGILTPVAELAPVFLSGSRVSRASLYNQDEIEKKDIRIGDSVYVEKGGEVIPKIVGINLAKR-SLES 394 Chlam...
WP_013943064           318 ETVIEDIIVQVGRTGVLTPVAELRPVPLAGSTISRATLHNEEEVARKDIRVHDTVMIEKGGDVIPKVVEVIQSKR-PKES 396 Simka...
6_pfamImport             1 ETDIYSITVQVGRTGVLTPVAELKPVFLAGSTIARATLHNEEEVLRKDIREGDSVIIEKGGDVIPKVVLVNFDKR-KSDS 79 
WP_013182297           317 ETRIRDIIVQVGRTGVITPVAELEPVLLAGSTISRATLHNEEEVERKDVRIGDSALIEKGGDVIPKVISINPEKR-REGS 395 Waddl...
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