1UL5


Conserved Protein Domain Family
SBP

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pfam03110: SBP (This model is not part of the current CDD release)
SBP domain
SBP domains (for SQUAMOSA-pROMOTER BINDING PROTEIN) are found in plant proteins. It is a sequence specific DNA-binding domain. Members of family probably function as transcription factors involved in the control of early flower development. The domain contains 10 conserved cysteine and histidine residues that probably are zinc ligands.
Statistics
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PSSM-Id: 515390
Aligned: 71 rows
Threshold Bit Score: 89.2028
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1UL5_A          6 CQVPDCEADISEl-kGYHKRHRVCLRCATASFVV-LDGE----NKRYCQQCGKFHLLPDFDE------GKRSCRRKLERH 73   thale cress
XP_005846755   40 CQVEGCGVDLTGl-rNFFRKQRICELHARADVVTdTAGR----QLRFCQQCTRLEPLINFNA------GRRSCKTSLAKR 108 
XP_005846722   94 CQVEGCGANIEGg-kPFYRLQRICEMHARSLAVTdASGR----ALRFCQQCTRMHSVSDFEG------AKRSCVASLKRR 162 
XP_002507948   78 CQVVGCDIEYSS---THECRARACQTHCSALSVR-LEGQdpeqQFRFCYQCHKFHELDAFRNpdgtlrPRHNCYQSQALR 153 
XP_003063374  173 CLVDNCENPRKQm-lQRARMYLTCAEHARAKMVM-FKDE----ECRECQACRTFHPLSEFDG------LNKTCETRLSRK 240 
XP_002504650  600 CLVDDCFTPRKQpseQNSRMPLTCKEHSGALVVL-YGGV----ASRECQACRTFHPITAFDR------DNKTCETRLLRK 668 
XP_002500625  126 CQVDDCLNPRKQp-tANSRMPLTCAEHNGMLSLT-YGGE----ASRECQACRAFHPVSAFDR------DNKTCETRLLRK 193 
XP_002952986   92 CQADGCMADLSGl-rRYFRRYHVCETHIRSQVVH-IGGR----EVRFCDQCSTFHPLAFFDG------VRRTCRDKLEQN 159 
XP_003059595  129 CTADGCDKACDTa---YTRRYRTCREHIDSLDVL-RDGL----HQRFCQRCSSFHALAAFDG------SRHTCRQALDAY 194 
XP_002500521   96 CRVDGCDVVFST---AHECRARACQKHCSALFVR-LKGArpdeQFRFCYQCHKFHPLDNFRGpdgtllARHNCSQSQVQR 171 
1UL5_A         74 NNRRKRK 80   thale cress
XP_005846755  109 QARAHRg 115 
XP_005846722  163 AERKQAQ 169 
XP_002507948  154 LDRRKKk 160 
XP_003063374  241 KVRYRAR 247 
XP_002504650  669 KLRYRAK 675 
XP_002500625  194 KLRYRAK 200 
XP_002952986  160 RMKRRAR 166 
XP_003059595  195 NESRRKI 201 
XP_002500521  172 LERRKRK 178 
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