3T30,1NLQ


Conserved Protein Domain Family
Nucleoplasmin

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pfam03066: Nucleoplasmin 
Nucleoplasmin/nucleophosmin domain
Nucleoplasmins are also known as chromatin decondensation proteins. They bind to core histones and transfer DNA to them in a reaction that requires ATP. This is thought to play a role in the assembly of regular nucleosomal arrays.
Statistics
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PSSM-Id: 397268
Aligned: 40 rows
Threshold Bit Score: 108.125
Threshold Setting Gi: 321477043
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3T30_A         6 LWGCELSQERrTWTFR----------PQLEGk--QSCRLLLHTICLGEKAK-E-EMHRVEILPPAn-qEDKKMQPVTIAS 70 
Q2F5N9         6 FYGVTLSSSHqSETWDp----------eAKAeypRSNKLVIRQALLGPDAKpD-ELNVIQVEAM----SLQEAVKLPVAV 70  domestic silkworm
XP_001845555   6 FYGATLKEGSkTVTWDp---------dNKADgypRTHKLIIKQCILGHEAAsD-EFNVVQVETM----TIRDTLRIPIAV 71  southern house ...
EDW53455       6 FYGVTLTAESdSVTWDv------------dEdyaRGQKLVIKQILLGAEAKeN-EFNVVEVN------TPKDSVQIPIAV 66  Drosophila sech...
XP_002073032   6 FYGVTLSEKEpIAQFDv--------pEIPEEyivHSHKLIIKQISLGHEAKtG-EFNVVQAETNAineGEKKTVKIPIAV 76  Drosophila will...
XP_002422837   6 FWGVTLSNTNkEVKWEpdalkenggiGEISLsakGEHTLIIKQALLSPSAKdS-EVNVIEVETT----GYKGNIRQPIIA 80  human body louse
EFX88002       7 FWGVQLDAKTkEIEWNpekn--fpkeEKEDGmpiPRHSLMIKQAILSHEAAeG-EMAVIEAEAVG---YAQSNIKTLISV 80  common water flea
1NLQ_A         6 FYGVTLTAESdSVTWD----------VDEDYa--RGQKLVIKQILLGAEAK-EnEFNVVEVNTP------KDSVQIPIAV 66 
XP_024086029   6 FWGVTLKKNKdKEVWDpdmk---avdGNESQgirGEHTLLVKQIVLGADAKdG-EVNVVEVEAM----GYKSDVRFPIAV 77  bed bug
XP_008183989   6 FWGVTLDKTKtTEVWDpdvk---gdaNDSAHvfrGEHTLLVKQAVLGPEVPdD-EVNVIEVEAM----GYKSDIKFPVVV 77  pea aphid
3T30_A        71 LQA-SVLPMVSMVGVQLSPPVTFQLRAGSGPVFLsgqerY 109
Q2F5N9        71 LKV-GESRHVRLDIEFPDAPVTFTLVQGSGPVHLighhlL 109 domestic silkworm
XP_001845555  72 LKV-GEARQCRLDLEFSDSPVTFTLVEGKGPVHIhgqhlL 110 southern house mosquito
EDW53455      67 LKA-GETRAVNPDVEFYESKVTFKLIKGSGPVYIhghnik 105 Drosophila sechellia
XP_002073032  77 LKV-GETRCLKPNVEFPNGSVTFKLIQGSGPVYVcgkaeM 115 Drosophila willistoni
XP_002422837  81 LVG-GKQQHLLLDLNFPDPPVMLRLIEGHGPVHIsgnhvI 119 human body louse
EFX88002      81 LVQ-GKDHQRSLDLVFHDAPVKLRLIKGSGPVHLvgahgV 119 common water flea
1NLQ_A        67 LKA-GETRAVNPDVEFYESKVTFKLIKGSGPVYIhghnik 105
XP_024086029  78 MKGgGPQSQAVLDLLFPDPPVTFHLVKGSGPVHLlgnhtV 117 bed bug
XP_008183989  78 LKGgTGHSQCVLDLLFPDPPVTFKLVKGNGPIHLlgnhsV 117 pea aphid
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