2DET


Conserved Protein Domain Family
tRNA_Me_trans

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pfam03054: tRNA_Me_trans (This model is not part of the current CDD release)
tRNA methyl transferase HUP domain
This family represents the N-terminal HUP domain in tRNA(5-methylaminomethyl-2-thiouridine)-methyltransferase which is involved in the biosynthesis of the modified nucleoside 5-methylaminomethyl-2-thiouridine present in the wobble position of some tRNAs.
Statistics
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PSSM-Id: 515359
Aligned: 19 rows
Threshold Bit Score: 283.76
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2DET_A  18 KKVIVGMSGGVDSSVSAWLLQQQG-YQVEGLFMKNWEED---DGEEY---CTAAADLADAQAVCDKLGIELHTVNFAAEY 90  Escherichia coli
O51625   1 MKIAVLLSGGVDSSVALYRIINKGySNIKCYYLKIWVEDe-lSYIGN---CPWQEDLNYVEAICNKFNVPYEIINFQKEY 76  Borreliella burgdorfe...
O25893   1 MKIAVLLSGGVDSSYSAYSLKEQG-HELVGIYLKLHASEkkhDLYIK-----------NAQKACEFLGIPLEVLDFQKDF 68  Helicobacter pylori 2...
O67274   1 MRVAVGMSGGVDSSVTALLLKEQG-HDVIRVTLRFHTVEaceVNETHn-vCCSPKDVQDASRVAKRLGIPHLVFSWEEIF 78  Aquifex aeolicus VF5
Q9WYZ0   1 MKVGVALSGGVDSAVALYLLLKEG-HEVKAFHMKTKEDEffiKKEIKkkvCCSPSDTADAMRIAHFLGVEIEIVDVKEIF 79  Thermotoga maritima MSB8
P9WJS5   1 MKVLAAMSGGVDSSVAAARMVDAG-HEVVGVHMALSTAPgtlRTGSRg--CCSKEDAADARRVADVLGIPFYVWDFAEKF 77  Mycobacterium tubercu...
O86583  11 LRVLAAMSGGVDSAVAAARAAEAG-HDVTGVHLALSANPqsfRTGARg--CCTIEDSRDARRAADVIGIPFYVWDLADRF 87  Streptomyces coelicol...
Q9RTK1  20 ERVLCAMSGGVDSSVTASLLKEQG-YQVIGAMMRFWPDDkrtDTFDS---CCSPDAAYEARRVAEQVGVPFYLLDYREPF 95  Deinococcus radiodura...
Q9ZDM1   2 ATIVVAMSGGVDSSAVAAMLHEQG-HNVIGITLQLYDYGiavGKKNA---CCAGQDIYDAKMVANKLGIPHYVLDYENKF 77  Rickettsia prowazekii...
Q12093  27 DNVIVAMSSGVDSSVAAALFAGEF-PNTRGVYMQNWSESqslDDPGKe--PCYERDWRDVNRVAKHLNIRVDKVNFEQDY 103 Saccharomyces cerevis...
2DET_A  91 WDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEdLG-AD-YIATGHYVRRAd---VDGKSRLLRGLDSNKDQSY 165 Escherichia coli
O51625  77 YNKVVSYTIEELKNGNTPSPDIFCNQRIKFGAFFEKINSq---YD-LVVTGHYAKIQi---KESKFLLKQAKDKIKDQSY 149 Borreliella burgdorfe...
O25893  69 KSAVYDEFINAYEEGQTPNPCALCNPLMKFGLALDHALK-LG-CE-KIATGHYARVKe---IDKISYIQEALDKTKDQSY 142 Helicobacter pylori 2...
O67274  79 KSKVIDYFVEEYKRGRTPNPCALCNREVKTGFFARYLKQvAD-ID-KLATGHYAKIEe--dKKYGLVIKRPKDRKRDQTY 154 Aquifex aeolicus VF5
Q9WYZ0  80 REKVIEPFKRDLLKGLTPNPCAHCNRFVKFGYLMDYVLN-QG-FD-AFASGHYARIEfs-eKYGRKVIKKGVDLKKDQSY 155 Thermotoga maritima MSB8
P9WJS5  78 KEDVINDFVSSYARGETPNPCVRCNQQIKFAALSARAVA-LG-FD-TVATGHYARLS-------GGRLRRAVDRDKDQSY 147 Mycobacterium tubercu...
O86583  88 REDVVEDFVAEYEAGRTPNPCLRCNEKIKFAALLDKALA-LG-FD-AVCTGHYAQVIl--rEDGVRELHRASDMAKDQSY 162 Streptomyces coelicol...
Q9RTK1  96 QRHIVGPFLEEYARGRTPNPCVNCNTKVKFDELVKKAKM-LG-CR-YVATGHYVKRVd--nAQGEVEFHRGDDPRKDQTY 170 Deinococcus radiodura...
Q9ZDM1  78 KESVIDNFVDSYLHGETPLPCVQCNKSVKFRDLINTAKE-LG-AD-KLATGHYVRKIn---GYNGAELHTGLDTTKDQSY 151 Rickettsia prowazekii...
Q12093 104 WIDVFEPMLRGYSEGSTPNPDIGCNKFVKFGKLREWLDEkYGtGNyWLVTGHYARVMqemnGKGLFHLLRSIYRPKDQSY 183 Saccharomyces cerevis...
2DET_A 166 FLYTLSHEQIAQSLFPVGE--LEKPQVRKIAEDLG--LV-TAKKKDSTGICFIGE 215 Escherichia coli
O51625 150 FLSHLSQKQMSKLYFPLGT--LLKSEVRQIAKNIN--LP-NKDRKDSQGICFLGK 199 Borreliella burgdorferi B31
O25893 143 FLYALEHEVIAKLVFPLGD--LLKKDIKPLALNAMpfLGtLETYKESQEICFVEK 195 Helicobacter pylori 26695
O67274 155 FLSLVRREDLELLTFPLGA--YTKEEVREIAKRYG--LE-VAQKRDSQEVCFLMG 204 Aquifex aeolicus VF5
Q9WYZ0 156 FLARIEPWRIERLIFPNGI--YTKEEIRKIAEEAG--IH-VAKKQESQDVCFIPD 205 Thermotoga maritima MSB8
P9WJS5 148 VLAVLTAQQLRHAAFPIGD--TPKRQIRAEAARRG--LA-VANKPDSHDICFIPS 197 Mycobacterium tuberculosis H37Rv
O86583 163 VLGVLDDRQLAHAMFPLGDtvTTKDEIRAEAERRG--LA-VAKKPDSHDICFIAD 214 Streptomyces coelicolor A3(2)
Q9RTK1 171 FLWGTPRDALPYILFPVGE--LEKPQVREIAAERG--LL-TAQKPESQNICFVPG 220 Deinococcus radiodurans R1 = ATCC 13939 = DSM ...
Q9ZDM1 152 FLFTITREQLEYLSFPLGG--FTKYETRKLASKFG--LD-IADKPDSQDICFVPD 201 Rickettsia prowazekii str. Madrid E
Q12093 184 YLSQINSTVLSSLLLPIGH--LTKPEVRDLAKYAG--LP-TAEKPDSQGICFVNN 233 Saccharomyces cerevisiae S288C
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