8J07,8J07,8GLV,8J07,8J07,8J07,8J07,8J07,8J07,7K5B,8GLV,7K5B,8GLV,7KEK,4RH7,8PQV,3VKH


Conserved Protein Domain Family
Dynein_heavy

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pfam03028: Dynein_heavy (This model is not part of the current CDD release)
Dynein heavy chain region D6 P-loop domain
This family represents the C-terminal region of dynein heavy chain. The chain also contains ATPase activity and microtubule binding ability and acts as a motor for the movement of organelles and vesicles along microtubules. Dynein is also involved in cilia and flagella movement. The dynein subunit consists of at least two heavy chains and a number of intermediate and light chains. The 380 kDa motor unit of dynein belongs to the AAA class of chaperone-like ATPases. The core of the 380 kDa motor unit contains a concatenated chain of six AAA modules, of which four correspond to the ATP binding sites with P-loop signatures described previously, and two are modules in which the P loop has been lost in evolution. This C-terminal domain carries the D6 region of the dynein motor where the P-loop has been lost in evolution but the general structure of a potential ATP binding site appears to be retained.
Statistics
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PSSM-Id: 515343
Aligned: 317 rows
Threshold Bit Score: 82.8675
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
8J07_g2      3425 NCCAPLIFVLSPGADPMAALLKFADDQGYGGsK--L-SS--------LSLGQGQGP-IAMKMLEKAVKEGTWVVLQNCHL 3492 human
XP_002954528 3743 RCDEPVLFITTPGADPSQELSEHAAATMGKE-R--Y-HE--------VAMGQGQAE-KAVALLRECAKSGDWLVLKNVHL 3809
XP_009022510 3630 HCREPILFIISQGADPSQELEDLAKKTVGLD-K--Y-NQ--------VALGQGQTD-TAIQLLKSCANKGEWLCLKNLHL 3696
XP_069046192 3719 LEIEPVLIIISPGADPSQELLELASETVGKE-S--Y-HE--------VAMGQGQAD-IAIQALKECARNGEWLCLKNLHL 3785
4RH7_A       2860 leiepiliiispGADPSQELQELANAERSGE-C--Y-HQ--------VAMGQGQAD-LAIQMLKECARNGDWLCLKNLHL 2926 synthetic con...
XP_029699182 3697 kEWEPVLIIISPGADPSQELADLAA------------ETmsrtsyheISMGQGQAD-VALATLRECSQNGEWLCLKNLHL 3763 torafugu
NP_001410228 3713 LETEPVLLIISAGADPSQELQELAGNIV----GreNyHE--------VAMGQGQAD-VALQALRECVRSGDWLCLKNLHL 3779 zebrafish
XP_007665028 3716 LEIEPILIIISPGADPSQELQELANAERSGE-C--Y-HQ--------VAMGQGQAD-LAIQMLKECAQNGEWLCLKNLHL 3782 platypus
XP_026693268 2919 HAAEPILIVLSAGADPSQELQELASSVVGEE-N--Y-FQ--------VAMGQGQSD-VAMQLVRECSRNGQWLCLKNLHL 2985 vase tunicate
XP_008897023 4085 QATRGVLLCSTTGFDPSAQIDELAAVQQ----K--KyNS--------VSMGSSEGFdAAEKGLNTALKHGTWLLLRNVHL 4150 Phytophthora ...
8J07_g2      3493 ATSWMPTLEKV---CEELSPESTHP-------DFRMWLTSYPSPNFPVSVLQNGVKMT 3540 human
XP_002954528 3810 AVSWLPSLEKEllmMP------KHE-------NFRLFLTSEPHPKFPSTLLEISLKIT 3854
XP_009022510 3697 SISWLSVLEKEfksLE------PHE-------NFRLWLTSEAHQNFPAVFLKTCLKVT 3741
XP_069046192 3786 VTAWLPLLEKElnaLQ------PKA-------SFRLWLTAEVHPKFTPILLQSSLKIT 3830
4RH7_A       2927 VVSWLPVLEKE---LNTLQPK---D-------TFRLWLTAEVHPNFTPILLQSSLKIT 2971 synthetic construct
XP_029699182 3764 VTTWLPLLEKE---LNGL---RPKA-------GFRLWLTAEVHPRFPPILLQSTLKIT 3808 torafugu
NP_001410228 3780 VTAWLPLLEKE---LN---SMKPKA-------GFRLWLTAEVHPKFTPILLQSSLKIT 3824 zebrafish
XP_007665028 3783 VVSWLPILENE---LNTL---QPKE-------NFRLWLTAEVHPKFTPILLQSSLKIT 3827 platypus
XP_026693268 2986 VTSWLPVLEKElnaLV------PDN-------NFRLWLTSEVHSKFPPILLQSSLKIT 3030 vase tunicate
XP_008897023 4151 CPSWLVSVEKK-----------LYNaresvhpNFRLFLTSEINPNLPVNLVRMCDIFV 4197 Phytophthora nicotianae INRA-310
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