Conserved Protein Domain Family
Lentiviral_Tat
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pfam02998: Lentiviral_Tat 
Lentiviral Tat protein
This family contains retroviral transactivating (Tat) proteins, from a variety of Lentiviruses.
Links
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Statistics
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PSSM-Id: 111843
Aligned: 7 rows
Threshold Bit Score: -1
Created: 19-Apr-2021
Updated: 29-Sep-2021
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
Q9W9Z0  1 MEEAPRRYPGGNRDADgIFQYYEEWECWDWVSQRVPGDILQRWLAMLTNSQLRRKVVKEMQRWIWRNPRAPIIRNCGCRL 80  Brazilian caprine lent...
Q9W8F7  2 TEELPQRREARPEERG-LSLWERERDTWQWTSIRVPGEMLQRWLAMLRLGRNRGKVYREMQKWMWRHPKATVIRPCGCRI 80  Brazilian caprine lent...
P35958  1 MEEVPRRQPGGLVEVEgVFQFYEDWECWDYVSQRVPGERLQRWLAMLTNNQLRRQVIREAQIWMWKHKGAAVRRNCGCRL 80  Visna/maedi virus EV1 ...
Q86553  2 MEEAPRRRPGGTQEIAgIFQFYEDWECWDYVSQRVPDEILQRWLAMLTNQRLRRLVITEAQKWVWRNPKAPVRKNCGCRA 81  Visna/maedi virus EV1
P21124  2 SEELPQRRETHPEELV-RNVRERERDTWQWTSIRVPEEILQRWLAMLRSGRNRKKVYREMQKWMWIHPKGPVIRACGCRL 80  Caprine arthritis ence...
Q9W959  2 NEEAPQRREIHQEDLV-RDIWERERDAWQWISVRAPGEVLQRWLAMLKSGRNRKRVLREMQKLMWRYPKAPVIRPCGCRL 80  Brazilian caprine lent...
Q65930  2 SEELPREREVSPEEAV-RNIWERERDTWQRASIRVPGETLQRWLAMLRLGRHRRKVLREMQKWMWKHPKAPVIRPCGCRL 80  Caprine arthritis ence...
Q9W8F7  2 TEELPQRREARPEERG-LSLWERERDTWQWTSIRVPGEMLQRWLAMLRLGRNRGKVYREMQKWMWRHPKATVIRPCGCRI 80  Brazilian caprine lent...
P35958  1 MEEVPRRQPGGLVEVEgVFQFYEDWECWDYVSQRVPGERLQRWLAMLTNNQLRRQVIREAQIWMWKHKGAAVRRNCGCRL 80  Visna/maedi virus EV1 ...
Q86553  2 MEEAPRRRPGGTQEIAgIFQFYEDWECWDYVSQRVPDEILQRWLAMLTNQRLRRLVITEAQKWVWRNPKAPVRKNCGCRA 81  Visna/maedi virus EV1
P21124  2 SEELPQRRETHPEELV-RNVRERERDTWQWTSIRVPEEILQRWLAMLRSGRNRKKVYREMQKWMWIHPKGPVIRACGCRL 80  Caprine arthritis ence...
Q9W959  2 NEEAPQRREIHQEDLV-RDIWERERDAWQWISVRAPGEVLQRWLAMLKSGRNRKRVLREMQKLMWRYPKAPVIRPCGCRL 80  Brazilian caprine lent...
Q65930  2 SEELPREREVSPEEAV-RNIWERERDTWQRASIRVPGETLQRWLAMLRLGRHRRKVLREMQKWMWKHPKAPVIRPCGCRL 80  Caprine arthritis ence...

Q9W9Z0 81 CNPGWGS 87  Brazilian caprine lentivirus
Q9W8F7 81 CNPGWGT 87  Brazilian caprine lentivirus
P35958 81 CNPGWGS 87  Visna/maedi virus EV1 KV1772
Q86553 82 CNPGWGS 88  Visna/maedi virus EV1
P21124 81 CNPGWGT 87  Caprine arthritis encephalitis virus strain Cork
Q9W959 81 CNPGWGT 87  Brazilian caprine lentivirus
Q65930 81 CNPGWGS 87  Caprine arthritis encephalitis virus
Q9W8F7 81 CNPGWGT 87  Brazilian caprine lentivirus
P35958 81 CNPGWGS 87  Visna/maedi virus EV1 KV1772
Q86553 82 CNPGWGS 88  Visna/maedi virus EV1
P21124 81 CNPGWGT 87  Caprine arthritis encephalitis virus strain Cork
Q9W959 81 CNPGWGT 87  Brazilian caprine lentivirus
Q65930 81 CNPGWGS 87  Caprine arthritis encephalitis virus
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