Conserved Protein Domain Family
BESS
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pfam02944: BESS 
BESS motif
The BESS motif is named after the proteins in which it is found (BEAF, Suvar(3)7 and Stonewall). The motif is 40 amino acid residues long and is composed of two predicted alpha helices. Based on the protein in which it is found and the presence of conserved positively charged residues it is predicted to be a DNA binding domain. This domain appears to be specific to drosophila.
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Statistics
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PSSM-Id: 486089
Aligned: 74 rows
Threshold Bit Score: 33.1273
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
XP_002074910  129 TSLYgGFLLDQLPFVEALSQLQRRRLEVEIVDAILQ 164 
XP_002006038  283 TEDD-YFCKSVAAYLRQLSRRHKIKAKVEMYQILEK 317 
XP_002129205  173 DADE-LFFASVLCEISGLPPKKKGKLKIDIMNLVHN 207 
XP_002027009  203 NPDD-AFLQGLRPEMEQMNFRKKLYFKSRVYALLGE 237 
NP_001261838  565 FSDN-YFLEMIKPQMQEMNPRQKMHFKKKVFQALME 599 
XP_002048388  583 FSDE-HFLDMVRPQMKEMNPRQKMHFKQKIFQALME 617 
XP_002068180  608 fSDQ-YFIDMVVPQMEQMNSRQKFYFKQKILSAIME 642 
EDW34090      325 fTDQ-HFLEIVRPQMAEMNPRQKLNFKKKVFHSLIE 359 
EFA09364      174 KSDH-YFMMSVVHDCQSLPPRKKLKFKKDVLGLLEK 208 
XP_039444428  227 cdDM-DFFRSMLPLIQVLPLYERMKFRMDVMRIGLE 261
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