Conserved Protein Domain Family
HDPD

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pfam02924: HDPD 
Bacteriophage lambda head decoration protein D
Statistics
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PSSM-Id: 397187
Aligned: 69 rows
Threshold Bit Score: 40.7227
Threshold Setting Gi: 160364463
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_012562741         3 PFVEGRHPAEFVLAEANGNRSRDNLKIGASQTILA--GTVLGVSAAkamAaasavkaggantgdgtmtldantpilpgak 80  Oligotrop...
WP_005285660         5 TQVEQRGDAFIFAGDDPAHTAVGQSGISEAVPAMT--PLMLDSST----------------------------------- 47  Edwardsie...
Q8ZMZ7               5 TTIEKRADNRIFAGNDPAHTATGVSGITAATPMLT--PLMLDDTT----------------------------------- 47  Salmonell...
EEB44464            11 THVEQRAEVHIFAGSDTAHTAQGVNGIATATPELT--PLMLDDAT----------------------------------- 53  Providenc...
CAR07240             5 TITEQRAEVRIFAGNDPAHTATGSSGISQATPALT--PLMLDEAT----------------------------------- 47  Escherich...
Q8X3N5               4 TSKETFTHYQPLGNSDPAHTATAPGGLSAKAPAMT--PLMLDTSS----------------------------------- 46  Escherich...
AFV29146             2 AITEVFTHNQPLGNSDPAHTAYGPGELTASTPAMT--PLMLDATS----------------------------------- 44  Enterobac...
OSL47332             3 TPYIELFAGSQQVATTLVHFAADAGVIQEFTPLML--------ADN---------------------------------- 40  Escherich...
lfz:NRG857_05765     3 THYTELMAGTEALVTTLGIFSANKGVIPAFTPLMQ--------EDA---T------------------------------ 41  Escherich...
wugsc:VIBHAR_01982   1 MLEQTEYTPDELFISAP---VTARATIKTGVSFPArtPLMADATDA---------------------------------- 43  Vibrio ca...
WP_012562741        81 lgvytvrciaaaanggtfrvenpngdvigdvavgatfaddikfviadgaadfvvgdgfdvtvtetdATLAEFGALNLada 160 Oligotrop...
WP_005285660        48 ------------------------------------------------------------------GKLVKWDG-QN--- 57  Edwardsie...
Q8ZMZ7              48 ------------------------------------------------------------------GKLVAWDG-QK--- 57  Salmonell...
EEB44464            54 ------------------------------------------------------------------GKLVVWDG-QK--- 63  Providenc...
CAR07240            48 ------------------------------------------------------------------GKLVVWDG-QK--- 57  Escherich...
Q8X3N5              47 ------------------------------------------------------------------RKLVAWDG-TT--- 56  Escherich...
AFV29146            45 ------------------------------------------------------------------GKLTVWDG-AH--- 54  Enterobac...
OSL47332            41 ------------------------------------------------------------------GEFKPWDG-QE--- 50  Escherich...
lfz:NRG857_05765    42 ------------------------------------------------------------------GALVVW-------- 47  Escherich...
wugsc:VIBHAR_01982  44 ------------------------------------------------------------------ATLVEWDGT----- 52  Vibrio ca...
WP_012562741       161 AGLAIAVAIALYPATTGAGeSVEIAGITRDCTVNGKCLEWPAGITD-QQKAAAVSQLAER-GI 221 Oligotropha carboxidovorans
WP_005285660        58 AGT--AVGVLAIALAG----SEQTLTYYKSGTFATDALVWPSSVDA-VKKANAFVGSALS-HI 112 Edwardsiella tarda
Q8ZMZ7              58 AGT--AVGVLALELDG----SENLLTYWKSGTFATESLAWPKSVDA-IKQANAFAGSAVS-HA 112 Salmonella enterica subsp....
EEB44464            64 SGT--AVGILALALTG----NEAHLTYYKSGTFATGALHWPDSVDA-VKKANAFIGC----AI 115 Providencia alcalifaciens ...
CAR07240            58 AGS--AAGILVLPLEG----TETVLTYYKSGTFATEAIRWPDSVDE-HKKANAFVGTALS-HA 112 Escherichia coli ED1a
Q8X3N5              57 DGA--AVGILAVAADQ----TSTTLTFYKSGTFRYEDVLWPEAASDeXEKTDRVCRNGNQ-HR 112 Escherichia coli O157:H7
AFV29146            55 AGA--AMGILAVTADQ----NSAELAYYKSGSFRIEDVLWPSAVTDdNIKRNAFAGTAI--SI 109 Enterobacteria phage phi80
OSL47332            51 SGK--AVYLTSYPVDTS---KQKSAQCYKTGIFNIAAVNWPESVDTdAKKCAAFAGSGVSvQP 108 Escherichia coli H461
lfz:NRG857_05765    48 DGSSVGKAVYVSAVQIDTA-KKTQAQVYKTGVLNVDALNWPESVKElSVKIAAFVGSGISvQP 109 Escherichia coli O83:H1 st...
wugsc:VIBHAR_01982  53 PGK--AIAISARDVTNTGS-DQESTVYL-QGGFRIGFVNWPDAVTTnKQKRAAFLGS----PV 107 Vibrio campbellii ATCC BAA...
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