3DM5,3NDB,2OG2


Conserved Protein Domain Family
SRP54_N

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pfam02881: SRP54_N 
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SRP54-type protein, helical bundle domain
Statistics
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PSSM-Id: 397149
Aligned: 1278 rows
Threshold Bit Score: 30.1214
Threshold Setting Gi: 315415326
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3DM5_A            6 LGKALANTLKKIARASSVDEALIKELVRDIQRALIQADVNVRLVLQLTREIqRRALEeKPpa-gIS---KKEHIIKIVYE 81  Pyrococcus f...
CCY74575          5 LTKSISGAFSKIRGKKVLSDKDIEESLLTIKEALLSADVSLEAANKFLEEAkSRALGkNK----LEgvdPSNQFIADVnd 80  Brachyspira ...
A0E7D9          277 lFQKLTGKIQNLTGNKQLTEEDLLPVLDDFKNALMQKNVAEEIAQKLVDSIkTNLLA-TK----TK---AFQSIRTSVQE 348 Paramecium t...
Q22T92          310 ffsKIVSNFKQLTGTKILDAQDLQPILDKFKEQLMNKNVGEQIAQQLCDSIkKNLIN-TQ----AK---ALTLLNKTVKE 381 Tetrahymena ...
XP_004029895    278 ffaSLSNSLKQLTGSKVLDAQDLQPVLEKFKDQLMSRNVAEQIAQQLCDSIkQNLLK-TK----SQ---AFTTLYKTVKE 349 Ichthyophthi...
EPB83665        310 tSSGLFSYFKSFTGQREMTAETLDPVIATIKEHLITQNVATHIADHLCQSVrTSLLG-KK----LG---SFERISTAVRN 381 Mucor circin...
CBJ30645        281 LKTSLGGFLHGLTGTKVLEERDLEPVMTKMREQLMGRNVASEVANDITASVqATLID-QK----LK---SFTRVKTAVQS 352 Ectocarpus s...
Q7VQG1            5 LSKKMSQSIRNIMYSKRVTKYDVSKYLDIVQRSLLESDVALSVVQSFVELVkDNIIK-INidscCI---SGPEFIKILRH 80  Candidatus B...
Q057I6            5 LTKKITNIFDKISYKSYLEKKTIKKTLNKIKLAFLDADVALNVIKLFLKKIkKKIKK-KKinknLS---PSQNLINIILK 80  Buchnera aph...
tigr:RIEPE_0053   5 iSKSFLDLFKTIRDRGIFKKKFLKHHLDKIKTLLIDSDVSVMVVKKILQKIeKEILK-SKieesFD---PSGDFIEIVRK 80  Candidatus R...
3DM5_A           82 EL 83  Pyrococcus furiosus
CCY74575         81 tl 82  Brachyspira sp. CAG:700
A0E7D9          349 AM 350 Paramecium tetraurelia
Q22T92          382 SL 383 Tetrahymena thermophila SB210
XP_004029895    350 SL 351 Ichthyophthirius multifiliis
EPB83665        382 sm 383 Mucor circinelloides f. circinelloides 1006PhL
CBJ30645        353 AL 354 Ectocarpus siliculosus
Q7VQG1           81 AL 82  Candidatus Blochmannia floridanus
Q057I6           81 EL 82  Buchnera aphidicola BCc
tigr:RIEPE_0053  81 TL 82  Candidatus Riesia pediculicola USDA
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