3DM5,2V3C,7O9F,7EPK,6FRK


Conserved Protein Domain Family
SRP54_N

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pfam02881: SRP54_N (This model is not part of the current CDD release)
SRP54-type protein, helical bundle domain
Statistics
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PSSM-Id: 515250
Aligned: 1090 rows
Threshold Bit Score: 29.3594
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3DM5_A         6 LGKALANTLKKIARASSVDEALIKELVRDIQRALIQADVNVRLVLQLTREIqRRALEeKppaG----------------- 68  Pyrococcus furi...
XP_001305857   5 LGDKLIGSIKKLSESKKIDETVYRNFMIEISKSLIAADVSKEIVFSFSKRLrEKINF-N---Eip-------------pg 67 
XP_001326126   5 LGEKLMGSIKKLSESKTIDEKVYVTFMAEVAKSLIAADCSKEIVFDFSRRLkDSINF-K---Eip-------------pg 67 
XP_007406455   6 LGKKINAAFADLQRTPLIDEKAVDSLLKGLATALLGSDVNVGLVSNLRNRV-KSKVT-P---Qlekl---------issp 71 
XP_003324178   6 LGKKINAAFSELQRTPLIDDKALDLLLKGISAALLSSDVNVTLVANLRNRV-KSKLS-P---Qlekl---------iqsp 71 
ELU44808       6 LGRKLNDAFAQLQRAPVVDDKVLDAILKDVCSALLESDVNVKLVASLRQKV-KATAK-A---Afegg----------adk 70 
CCA77807       6 LGRKLNSALSNLNKSPVVDEKVLDELLKEITKALLESDVNVKLVQTLKKQV-KAKVK-P---Ales-----------tdk 69 
Q385M8         6 LGQKIGAAISKMSSKSFVGEDDVKEFLNEVARALLQADVNVKTVKELQQNV-RAEVA-I---Taea------------ag 68  Trypanosoma brucei
Q4QAR0         6 LGQKIGQAIHRMSAKSMLGEDDVKELMNEIARALLQADVNVTIVKKLQVSI-RTELA-L---Aeeg------------ag 68  Leishmania major
KDE04130       6 LGRKLNQAISSLSGSSPIDETALDLTLKTVCTALLESDVNVQLVKRLRDKV-KAIVL-P---Plvelqtrdgnqtdavag 80 
3DM5_A        69 IS---KKEHIIKIVYEEL 83  Pyrococcus furiosus
XP_001305857  68 LS---AKRVIEKAVFNEL 82 
XP_001326126  68 LS---IRRVIEKAVFNEL 82 
XP_007406455  72 AK---QKQLVQKTVYDEL 86 
XP_003324178  72 AK---QKQLVHKTVFDEL 86 
ELU44808      71 GKeanRKGVVQKAVFDEL 88 
CCA77807      70 SKegqRKSIIQKAIFDEL 87 
Q385M8        69 LN---KRKMLQTAVFNgi 83  Trypanosoma brucei
Q4QAR0        69 LN---KRKILQNAVFNgl 83  Leishmania major
KDE04130      81 QK---GKQVIHKTVFDEL 95 
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