6JQF,6PWI


Conserved Protein Domain Family
Glyco_hydro_20b

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pfam02838: Glyco_hydro_20b 
Glycosyl hydrolase family 20, domain 2
This domain has a zincin-like fold.
Statistics
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PSSM-Id: 397121
Aligned: 60 rows
Threshold Bit Score: 76.1893
Threshold Setting Gi: 81793940
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6JQF_A         88 KPRIIPEILQW-KG-GQGE---YKLG-NTVTIACPDkELGK---LFAAD-XEDVLGKKVK---LVAPGA--KADISLS-L 151
Q2K130         32 QISVIPWPNHV-TV-ASRRplpAGFA-PQARSSEGE-AAAKgfaALVDHlFA-VEGIVRS---EAEGAV--PVILK---- 97  Rhizobium etli...
Q1GCZ5        132 TCGILPEPKRV-AI-SNWA---ETAP-VHLALQSDDaAVMQlvsRVSEL-TRRLHPLAPT---PFVLTA--KEDVALLcI 199 Ruegeria sp. T...
WP_013686093   20 HSSIFPQPTNV-EY-TTEQ---FVFN-GQLALDSTK-VPKKlfeYIQKS-FGRIHAIHLE----ASSAK--NANIQLQ-Q 84  Fluviicola taf...
Q6LUT4        138 AINLIPEPNKL-KV-LGGE---FAFT-QHTAITTPDtMAQGavrWLQSE-LEKQLH--------DALPIndNGNIHFQ-- 200 Photobacterium...
Q9KUB0        136 elcLIPKPNSL-QR-FQGE---FVVN-HSSQISLQSdSAARaarWLEQE-LHALHEFKLN---T-VG----HSDIVYR-S 199 Vibrio cholerae
Q1J0J6         34 RADLVPPPQRA-EF-PAGT---LPLAgLGVKVVGNApELAWavrDLREE-WHTRLGATLPd--SGQTPI--VIGTRAD-A 102 Deinococcus ge...
Q9L1V1         10 aTDVIPRPRHA-VA-QDAC---FDLG-PDTRLVADE-GAGHterWLRAT-LGAATGLPLA---PGE-GG--GGAVRL--S 73  Streptomyces c...
CBG72627       13 GTDLIPAPLAV-EGpLRRG---VPLD-GNTTLWAAP-GTEDtarWLRST-VGAALGLSLP---PGPEDA--RDAVRL--C 78  Streptomyces s...
BGI:SBI_06568   7 ATGLIPAPHRAyEL-LDGAh--YLLD-AETLLHAGP-GTEStarWLRAT-VGAATGLPLPpgeDHDNGV--LLRISPE-- 76  Streptomyces b...
6JQF_A        152 LKgg--------nLGREGYRLQIARD-GVRLGAAAPTGLFWGTRTLLQXLRQt-----------PG----SVP-CG-TAV 205
Q2K130         98 -Daa--------gFGPEAYRLSFDED-TLTVEASGRTGFLYGLVTLGQIWRGa----------rLHpgvfQFP-ASgEIV 156 Rhizobium etli...
Q1GCZ5        200 TPdq--------tLPADGYRITWDEG-KTTLHHGSGRGLFYGLVSLAQMLTHa----------hAEpqryGVPlSG-EIE 259 Ruegeria sp. T...
WP_013686093   85 VNt---------lVYTEGYQLSVTNS-GIEIQYSSYQSLCNAFQSLNQLFQNq------------T----KLA-GI-RIS 136 Fluviicola taf...
Q6LUT4        201 -Yha--------dLINGAYHLLVEQD-DVWIQASTESGFVNAASSLLQLLPTaprh----dasaAY----VIP-MV-EIE 260 Photobacterium...
Q9KUB0        200 np----------tLDEGHYQLNIEAQ-GIKIEAGSHSGFMHASATLLQLAQAh----------qGSl---RFP-LV-NIV 253 Vibrio cholerae
Q1J0J6        103 dlaakaeaaglstTAPESYALWVDGT-GAYVVGADARGAYHGAQTLRQLLTPs-----------------gLR-FA-RIQ 162 Deinococcus ge...
Q9L1V1         74 Ldg---------eLADEGYRLDIAPD-GVRLTGGGPAGLFWGAQTLRQLLGPdafrra-plpgrRW----RLP-LG-RIE 136 Streptomyces c...
CBG72627       79 LDd---------gLAPEEYRLGAAPDrGIEIRGGGPAGVFWGAQTLRQLLGPeafrrapvrpggTY----GVP-HQ-TVR 143 Streptomyces s...
BGI:SBI_06568  77 -Ier--------eLGPEGYRITADGH-AIRIEGGGPAGVFWGAQTFRQLLGPdafrrapvvtreEW----AVP-CG-VIE 140 Streptomyces b...
6JQF_A        206 D 206
Q2K130        157 D 157 Rhizobium etli CFN 42
Q1GCZ5        260 D 260 Ruegeria sp. TM1040
WP_013686093  137 D 137 Fluviicola taffensis
Q6LUT4        261 D 261 Photobacterium profundum
Q9KUB0        254 D 254 Vibrio cholerae
Q1J0J6        163 D 163 Deinococcus geothermalis DSM 11300
Q9L1V1        137 D 137 Streptomyces coelicolor
CBG72627      144 D 144 Streptomyces scabiei 87.22
BGI:SBI_06568 141 D 141 Streptomyces bingchenggensis BCW-1
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