5AH4,6DJ8,5WYP,1UNN,6E8D


Conserved Protein Domain Family
DNA_pol3_beta_2

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pfam02767: DNA_pol3_beta_2 
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DNA polymerase III beta subunit, central domain
A dimer of the beta subunit of DNA polymerase beta forms a ring which encircles duplex DNA. Each monomer contains three domains of identical topology and DNA clamp fold.
Statistics
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PSSM-Id: 397061
Aligned: 12 rows
Threshold Bit Score: 141.674
Threshold Setting Gi: 118804
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5AH4_A 141 IASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGE----SVVLAATDRFRLAVRELTWVTTAGDvEAAVLVPAKTLAEA 216 Mycolicibacterium sme...
P52023 131 LSASALIEGLRGTLFATSGDETKQILTGVHLKVQPD----GLEFAATDGHRLAVVKTENAAATPAtEFAVTVPSRALRDL 206 Synechococcus elongat...
P27903 127 VPGEVFASAVQQVAIAAGRDDTLPVLTGVRIEIEGD----SVTLASTDRYRFAVREFLWKPENPDiSAVALVPAKTLQDT 202 Streptomyces coelicol...
P46387 139 LPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGD----TVVLAATDRFRLAVRELKWSVLSSDfEASVLVPAKTLVEV 214 Mycobacterium leprae TN
6DJ8_B 155 IKQKSFKKVINRIAFSAHLDESKNVLNGVYFSKDEDs---KLLLVSTNGHRMSICKTEVIVEED---VNFIVPVKIFNFL 228 Borreliella burgdorfe...
5WYP_A 131 VDTNELIRLIDKTRFAISTEETRYYLNGLYVHTVNEggetKLRAVATDGHRLALAEMPAPEGAVG-IPGVIVPRKTIAEA 209 Caulobacter vibrioide...
P0A120 130 LEQSKLRRLIERTSFAMAQQDVRYYLNGMLLEVSRN----TLRAVSTDGHRLALCSMSAPIEQED-RHQVIVPRKGILEL 204 Pseudomonas putida KT...
1UNN_B 130 LPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGE----ELRTVATDGHRLAVCSMPIGQSLPS--HSVIVPRKGVIEL 203 Escherichia coli
P43744 130 LPQNTLRRLIEATQFSMANQDARYFLNGMKFETEGN----LLRTVATDGHRLAVCTISLEQELQN--HSVILPRKGVLEL 203 Haemophilus influenza...
Q6MUM6 134 LNPKEVKKTIYQVSVSMNENNKKLILTGLNLKLTNN----QAIFSTTDSFRISQKILEIQSNNNE-DIDITIPFKTALEL 208 Mycoplasma mycoides s...
6E8D_C 175 IPTDLLKNLIRQTVFAVSTSETRPILTGVNWKVEQS----ELLCTATDSHRLALRKAKLDIPEDR-SYNVVIPGKSLTEL 249 Bacillus subtilis
Q2G2H4 138 LSVKVLKNVIAQTNFAVSTSETRPVLTGVNWLIQEN----ELICTATDSHRLAVRKLQLEDVSE--NKNVIIPGKALAEL 211 Staphylococcus aureus...
5AH4_A 217 AKAGTD---GNQVHLALGsgasvgkDGLLGIRSEGKRSTTRLLDAEFPK 262 Mycolicibacterium smegmatis
P52023 207 ERMIAIrgsDEAIALYHD-------QGQTVFQWGDQYLTSRTLDGQYPN 248 Synechococcus elongatus PCC 7942 = FACHB-805
P27903 203 AKALTS---GDQVILALSgsg--agEGLIGFEGAGRRTTTRLLEGDLPK 246 Streptomyces coelicolor A3(2)
P46387 215 AKAGTD---GSGVCLSLGagvgvgkDGLFGISGGGKRSTTRLLDAEFPK 260 Mycobacterium leprae TN
6DJ8_B 229 KHLMSG---EGMVKIKFS-------DKKFYVEFDNYKIACSLINGNYPD 267 Borreliella burgdorferi B31
5WYP_A 210 RRLMESa--GETVDLQVS-------PQKVRFEFGAAALTSKVIDGAFPD 249 Caulobacter vibrioides CB15
P0A120 205 ARLLTDp--EGMVSIVLG-------QHHIRATTGEFTFTSKLVDGKFPD 244 Pseudomonas putida KT2440
1UNN_B 204 MRMLDGg--DNPLRVQIG-------SNNIRAHVGDFIFTSKLVDGRFPD 243 Escherichia coli
P43744 204 VRLLETn--DEPARLQIG-------TNNLRVHLKNTVFTSKLIDGRFPD 243 Haemophilus influenzae Rd KW20
Q6MUM6 209 PKVLDN---AENLKIIIV-------EGYITFIIDNVIFQSNLIDGKFPN 247 Mycoplasma mycoides subsp. mycoides SC
6E8D_C 250 SKILDDn--QELVDIVIT-------ETQVLFKAKNVLFFSRLLDGNYPD 289 Bacillus subtilis
Q2G2H4 212 NKIMSDn--EEDIDIFFA-------SNQVLFKVGNVNFISRLLEGHYPD 251 Staphylococcus aureus subsp. aureus NCTC 8325
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