2GN4


Conserved Protein Domain Family
Polysacc_synt_2

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pfam02719: Polysacc_synt_2 
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Polysaccharide biosynthesis protein
This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein, mannosyl-transferase, and several putative epimerases (e.g. WbiI).
Statistics
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PSSM-Id: 397023
Aligned: 63 rows
Threshold Bit Score: 384.557
Threshold Setting Gi: 81391267
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2GN4_A        24 ILITGGTGSFGKCFVRKVLDTt---NAKKIIVYSRDELKQSEMAMEf-------nDPRMRFFIGDVRDLERLNYALEGVD 93  Helicobacter py...
Q6AGK7        11 VTVTGGTGSFGSTMARHLLSR----DVGEIRIFSRDESKQDALRHEv-------nDPRMRFYIGDVRDSLSVTRAIKGSD 79  Leifsonia xyli ...
Q74AV4         7 LLITGGTGSFGNAVLKRFLDT----RISEVRIFSRDEKKQEDMRIAln-------ndRLKFYIGDVRDYDSLDSAMKGVD 75  Geobacter sulfu...
Q9ZDJ5         7 LMITGGTGSFGNAVLSRFLKSniinDIKEIRIFSRDEKKQEDMRIAl-------nNSKLKFYIGDVRNYQSIDDAMHGVD 79  Rickettsia prow...
Q5LE45         7 LLITGGTGSFGNAVLKRFLDS----DIKEVRIFSRDEKKQDDMRHRl-------qNKKVKFYIGDVRDKRSVDGVMNGVD 75  Bacteroides fra...
Q8AAT3         9 LMITGGTGSFGNAVLNRFLRT----DIGEIRIFSRDEKKQDDMRHEyqvkypdvaH-KIKFFIGDVRNLQSCKNAMPGVD 83  Bacteroides the...
Q2G1K4         7 LLITGGTGSFGNAVMKQFLDS----NIKEIRIFSRDEKKQDDIRKKy-------nNSKLKFYIGDVRDSQSVETAMRDVD 75  Staphylococcus ...
Q81A42         6 ILITGGTGSWGHELIKQLLEK----SPKEIRVFSRNETVQFEMQQQfi------nDHRLKFIIGDIRDKDQLVYACQGVH 75  Bacillus cereus...
Q97H20         9 VLIVGGTGTIGHGLINELLKE----NPKVIRIFSRDEYKQFLMQNEfr-----giAEKFRFLIGDVRDYDRVERAMNGID 79  Clostridium ace...
WP_000475901   7 LLITGGTGSFGKAVLDRFLNS----DIREIRIFSRDEKKQDDLRKKh-------nNSKLKFFVGDVRDLDSVRNAFRGVE 75  Leptospira inte...
2GN4_A        94 ICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAANPINLYGATKLCSDKLFVSANNFKgs- 172 Helicobacter py...
Q6AGK7        80 HVFHAAALKQVPSGEFFPLEVVATNITGSGNVIRAAIEHQAKSVVCLSTDKAVYPINAMGMTKALMEKTAFAMARENld- 158 Leifsonia xyli ...
Q74AV4        76 YVFHAAALKQVPSCEFYPMEAVRTNILGAENVLNASIANHVKKVIVLSTDKAVYPINAMGLSKAMMEKLMVAKSRTTdi- 154 Geobacter sulfu...
Q9ZDJ5        80 YVFHAAALKQVPTCEFYPMEAINTNVLGAENVLSAAINNKVTKVIVLSTDKAVYPINAMGLSKALMEKLAIAKARMRsp- 158 Rickettsia prow...
Q5LE45        76 YIFHAAALKQVPSCEFFPVQAVRTNVLGTENVLDSAIEHGVKNVVVLSTDKACYPINAMGISKAMMEKVAIAKGRQMgeg 155 Bacteroides fra...
Q8AAT3        84 YIFHAAALKQVPSCEFFPMEAVKTNVIGTDNVLTAAIEAGVGAVICLSTDKAAYPINAMGITKAVEEKIAVAKSRYsg-- 161 Bacteroides the...
Q2G1K4        76 YVFHAAALKQVPSCEFFPVEAVKTNIIGTENVLQSAIHQNVKKVICLSTDKAAYPINARGISKAMMEKVFVAKSRNIrs- 154 Staphylococcus ...
Q81A42        76 YVFHLAALKHVPVCEYYPYEAIKTNIHGTQNVIEASTQMQVEKVIYVSTDKAADPSNTYGMTKAIGEKLMVHANIQTk-- 153 Bacillus cereus...
Q97H20        80 VVFNLAAMKHVPACEYNPEEAIRTNITGMENVIKAATYHNVECVVFTSSDKAINPTNSYGATKLLAEKLVQAANYSKgn- 158 Clostridium ace...
WP_000475901  76 YVFHAAALKQVPSCEFFPLEAVKTNVLGTENVIEAAIQCNVKKVVCLSTDKAVYPINAMGISKAMMEKVMVAKSRSIek- 154 Leptospira inte...
2GN4_A       173 sqTQFSVVRYGNVVGSRGSVVPFFKKLVQNKaSEIPITDIRMTRFWITLDEGVSFVLKSLKRMHGGEIFVPKIPSMKMTD 252 Helicobacter py...
Q6AGK7       159 teTVVSVTRYGNVMYSRGSVIPLFIKQLTTG-QNVTVTDPEMTRFLMSLAQSVDLVEYAFTQATSGDLFVRKAPASTVAV 237 Leifsonia xyli ...
Q74AV4       155 trTVLCATRYGNVMASRGSVIPLFVQQIKEG-KSLTLTDPNMTRFLMSLEDSVDLVLYAFAHANSGDILVQKSPASTIRD 233 Geobacter sulfu...
Q9ZDJ5       159 geTILCVTRYGNVMASRGSVIPLFIHQIKQG-KELTITEPSMTRFLMSLVDSVDLVLYAFEHGRQGDIFVQKSPASTIEV 237 Rickettsia prow...
Q5LE45       156 gqTTICCTRYGNVMASRGSVIPLWVEQMKAG-KDITITDPNMTRFMMTLDDAVDLVIYAFQHGHNGDLFVQKAPAATLDT 234 Bacteroides fra...
Q8AAT3       162 -kTKICCTRYGNVMCSRGSVIPLWIEQIRNG-NPVTLTEPTMTRFIMSLEEAVDLVLFAFEHGQNGDILVQKAPACTIQT 239 Bacteroides the...
Q2G1K4       155 eqTLICGTRYGNVMASRGSVIPLFIDKIKAG-EPLTITDPDMTRFLMSLEDAVELVVHAFKHAETGDIMVQKAPSSTVGD 233 Staphylococcus ...
Q81A42       154 -kTKFICVRGGNVLGTSGSVVPLFKQQIKRS-SEVGITDANMTRFFLTVEDAVGLLFKAVYQGRGGEIFVMKMPACKITD 231 Bacillus cereus...
Q97H20       159 vrTKFVAVRFGNVMGSRGSVIPLFKKQIEEN-AVITVTDPTMSRFMMTLSQAVKLIMTAAKEATGGEVFILKMPVIKLID 237 Clostridium ace...
WP_000475901 155 sdMMVCGTRYGNVMASRGSVIPLFIEQVKSG-KPITITDPNMTRFMMSLEDAVELVLFAFQNGNNGDIFVQKASAATIEV 233 Leptospira inte...
2GN4_A       253 LAKAL-----------APNTPTKIIGIRPGEKLHEVMIPkDESHLALEFEDFFIIQP 298 Helicobacter pylori
Q6AGK7       238 LLEAVanv------igVPMPDVDIIGVRHGEKLYESLLGsEEMAKAEDRGDYFRVPL 288 Leifsonia xyli subsp. xyli
Q74AV4       234 LAQALke-------lfSAGNEIKIIGTRHGEKLYETLVTrEEMVRAEDLGTYYRIPS 283 Geobacter sulfurreducens
Q9ZDJ5       238 LAKALqei-------fgsKNAIRFIGTRHGEKHYESLVSsEDMAKADDLGGYYRIpm 287 Rickettsia prowazekii str. Madrid E
Q5LE45       235 LARSLke-------iyKMDTPVRVIGTRHGEKLYESLVTrEEMAKAEDMGNYYRIpc 284 Bacteroides fragilis NCTC 9343
Q8AAT3       240 QAEAVcel------fgGKKEDIKVIGIRHGEKMYETLLTnEECAKAEDMGNFYRVPA 290 Bacteroides thetaiotaomicron
Q2G1K4       234 LATALle-------lfEADNAIEIIGTRHGEKKAETLLTrEEYAQCEDMGDYFRVpa 283 Staphylococcus aureus subsp. aureus NC...
Q81A42       232 LAEILied------skKENIKVKEVGIRPGEKLSEMLLSeVESKTSISFDQNYFVVL 282 Bacillus cereus ATCC 14579
Q97H20       238 LAKVVveetsrkldinPERIKIKEIGLRAGERCYEELMTrEESVNAYDLGHSYVVIP 294 Clostridium acetobutylicum
WP_000475901 234 LSKALlel------ldKPHHPVEIIGTRHGEKLYETLLSrEEMANAEDLKDYYRVPp 284 Leptospira interrogans
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