Conserved Protein Domain Family
DsbD_TM

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pfam02683: DsbD_TM (This model is not part of the current CDD release)
Cytochrome C biogenesis protein transmembrane domain
This entry represents the transmembrane domain of Cytochrome C biogenesis proteins also known as disulphide interchange proteins, such as DsbD from E. coli and DipZ from Mycobacterium. These proteins posses a protein disulphide isomerase like domain that is not found within the aligned region of this family. DsbA and DsbC, periplasmic proteins of E. coli, are two key players involved in disulphide bond formation. DsbD generates a reducing source in the periplasm, which is required for maintaining proper redox conditions. DipZ is essential for maintaining cytochrome c apoproteins in the correct conformations for the covalent attachment of haem groups to the appropriate pairs of cysteine residues.
Statistics
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PSSM-Id: 515108
Aligned: 169 rows
Threshold Bit Score: 111.826
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EIJ43050     228 IFYTLLLFFGFGLLLAFTPCVFPMIPIL---------SSIIVGQgKQLSTYSAFSL-SLVY-----VLSMALTYTVAGVF 292
WP_229743275 195 TLMVVAGFFGLGLLLSLTPCVFPMIPIV---------AGMVAGGsQRPSARRGALL-GGAY-----VLGMAGAFALIGAA 259 Salipiger
P9WG62       115 LTLALVGFLG-GLITGISPCILPVLPVIffsgaqsvdAAQVAKPeGAVAVRRKRAL-SATLrpyrvIGGLVLSFGM---- 188 Mycobacterium t...
WP_054600884   3 GVGLLGAFLG-GLASLLSPCSALLLPSF---------FAY------AFDRTRLLILrTFAF-----WVGLCAVLVPLGAG 61  Mycolicibacteri...
RXF75574     189 LTVVLATFFGLGLLLALTPCVYPMIPIL---------VGVLARSgEALSPRRGLAL-SLSY-----VAAMAAAYGALGVA 253
BCP51451     211 AAVMLVAFLGFGLLLALTPCVFPMIPIL---------SGIIARSgADTSARRGFTL-SLAY-----VLAMAAAYGLLGVV 275
4_pfamImport   1 AIWNFFKFILIGLGLTFTPCVFPMIPII---------SGIIAGQgKDISTRRAFGL-SLTY-----TQAVAIVYAIFGVL 65 
WP_109761713 240 VIIGFFSLVLLGIGLAFTPCVFPMMPII---------SSIIAGQgKNITTSKAFFL-SLTY-----TQAMAIPYVIIGFI 304 Pleionea medite...
WP_246119260 209 LYEIVAYFVLLGIGLAFTPCVLPMVPIL---------SSIIVGQgKSVSTGKAFGL-SLAY-----TQAMAIPYTIIGVL 273 Aliikangiella c...
WP_142944114 227 LLEIVIWGVLGGILLAFTPCVLPMVPIL---------SSIIVGQgKEVSTGKAFGL-SLAY-----TQAMAIPYTLLGIL 291 Aliikangiella m...
EIJ43050     293 AGLVGENLQASFQEPIVIIVFSLIFLALALSMFGFYNLQMPNVLQSKLTDVSNQQKGGTWIGVAIMGFLSALIVGPCVAA 372
WP_229743275 260 AAWSGENLQIALQSPPAVILTAGLFVLLAVAAFGLFELRMPAAVTARLNRVEGRR--GSLPGAALLGVTSALIVGPCVTA 337 Salipiger
P9WG62       189 VTLLGSALLSVLHLPQDAIRWAALVALVAIGA-GLIFPRFEQLLEKPFSRIPQKQIVTRSNGFGLGLALGVLYV-PC-AG 265 Mycobacterium t...
WP_054600884  62 VGALGSVVTRYRSEVTVIGG-------LVLIGFGLMTLLGKGFGVSGMQRMTARINISGTVSVLALGAVYGL-AGFC-AG 132 Mycolicibacteri...
RXF75574     254 AALTGQNLQTALQTPAALTVASLVFVGLALSMFDIFQLQAPAAIASRIAPLTSWAR-GSVLGAASLGFVSALMVGPCVTP 332
BCP51451     276 AAWSGQNLQAALQTPWALGLMSLVLVALALSMFGLYDLQAPAFL-SRFLQPATAGKGGSLAGAALLGFGSALIVGPCVTP 354
4_pfamImport  66 VALAGKSLSGYLQSPFFVIGAAIVFVILSLSMFGFYELQLPASLQAKLANKSNSQKGG-YIGTAIMGAISALIVSPCVTV 144
WP_109761713 305 VAGVGASATATLQSPPFVIGAAVVFLLLSLGMFGFYEIQLPTSVQNKLNQVSQKQQSGTYIGAGIMGAISGTVVSPCVTI 384 Pleionea medite...
WP_246119260 274 VGAAGSSFVNTFQEPLFIIIAAVIFVLLSLSMFGFYELQLPQSMQNRLNNISNSQEGGSYLGAAIMGAISALVVSPCVTV 353 Aliikangiella c...
WP_142944114 292 AASLGEGFSTTLQQPLFIGITAVIFLLLSLSMFGFYELQLPQGLQNRINNLSNSQESGSYVGAGVMGALSALVVSPCVTV 371 Aliikangiella m...
EIJ43050     373 PLAGILIYISQTK-DAVFGGMALFS-LSLGMGVPLLLIGTSAGRFLPKAGLWMETVKQVFGVLLLAVAWWLLARLL 446
WP_229743275 338 PLAGALLYIAQSG-DLLLGAVALFA-LGLGQGLPLVAVAAFGPQVLPRSGAWMERIRQLFGLVFLGLAVWMLGRIL 411 Salipiger
P9WG62       266 PILAAIVVAGATA-TIGLGTVVLTAtFALGAALPLLFFALAGQRIAERVGAFRRRQREI--------------RIA 326 Mycobacterium tuber...
WP_054600884 133 PLLGAVLTMSAMGaDPVYGALLMAI-YALGMATPLFLL------------AWL------WDRFKLSERTWLRGRPV 189 Mycolicibacterium f...
RXF75574     333 PLAAALVYVAQTG-DVVRGSSALFA-LGLGMGAPLVAVGVFGAKILPKSGRWLTGVKHGFGIVFLGVAIALIGRVA 406
BCP51451     355 PLAAALLYVSQTG-DVARGAGALFA-LGLGMGLPLIAVGTFGAGVLPRAGPWLGRIKGIFGIVFLGLAIEMAGRVL 428
4_pfamImport 145 PLIAILLFIAQSG-DLFLGATALYG-LGIGMGIPLIIIAVTEGKFLPKAGPWMDGIKAAFGVAMLAVALYLIKHLL 218
WP_109761713 385 PLIAVLTWISQVG-DSVTGAIYLYG-LAVGMGIPLIMIGVGGGKLMPKAGNWMNAVKAVFGVLMIVVALYITKHLI 458 Pleionea mediterranea
WP_246119260 354 PLAGVLLYIAQTG-DQLIGGAALYS-LALGMGIPLLIVGVGGGKILPKAGAWMNAVKGAFGVGMLGLALYISKHLI 427 Aliikangiella coral...
WP_142944114 372 PLSALLIYIAKTG-DIVIGGVGLYA-LAVGMGIPLIMVGVGGGKFLPKAGAWMNAIKAGFGVVMIGMALYISKHLI 445 Aliikangiella marina
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