3HYI


Conserved Protein Domain Family
HTH_WhiA

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pfam02650: HTH_WhiA 
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WhiA C-terminal HTH domain
This domain is found at the C-terminus of the sporulation regulator WhiA. It is predicted to form a DNA-binding helix-turn-helix structure. The WhiA protein also contains two N-terminal domains that are distant homologs of LAGLIDADG homing endonucleases.
Statistics
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PSSM-Id: 396976
Aligned: 280 rows
Threshold Bit Score: 65.4956
Threshold Setting Gi: 525980858
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3HYI_A        208 NRTVNFIEANAIRTANSTARQIRAIELIKENMGLENLPEDLRRVALVRLRNKELSLRELGKKL------NLTKSQIYSKL 281 Thermotoga mar...
WKK:WKK_04555 221 NRLVNAENANIDKTVSASQKQVQDIEFLDEEIGLDRLPIKLREIAEIRLAHRDDPLSELGQYVhs---gQITKSGVNHRL 297 Weissella kore...
CDD08773      242 NRKSNCSVANMDKTAIASTKQLLAIENIEKNFGVKRLSDELRSLIALRKEYPEATLDFFAEKL------GVSKSCINHRF 315 Clostridium sp...
EDS19609      220 NRWNNCDIANEMKSMATANKQLEDIETVDMFLGLDMLDEKTRAVALIRKKYPELTLNELTEVYyeetgqTISKSGLHHRF 299 Erysipelatoclo...
WP_022001630  221 NRWNNCDIANEVKSMASSNKQLEDISIIEMFMGLDMLDEKTRTVALIRKKYPDYTLNELCNAYqdetglTISKSGLHHRF 300 Erysipelotrich...
WP_002606004  220 TRLDNCELANEMKSITAGKKQLEDIQWIETYRTLDSLPEKLQHVAYARKQLPEASLNELCEYCaeefneTISKSGMKHRL 299 Firmicutes
CBK88879      220 TRLDNCEVANEMKAMKAAKKQLEYIEIIEKNASKLKISKKIQNVITIRKKFPEASMNELCDEVyreygdIISKSGMKHRL 299 Faecalitalea c...
WP_022093285  220 TRLDNCEVANEIKTQKAAKKQLAYIEILEKNSHRVDISEKIRHVMEIRKKFPDANMNELCEEVyreygdIISKSGMKHRL 299 unclassified F...
Q5FL56        223 NRLVNCDTANMKKTASASAKQVEDIQLIQKEKGLDDLSEKLQILANFRLAHPELTLKEVADQIpd---gPISKSGVNHRF 299 Lactobacillus ...
Q1GB32        223 NRLVNCDTANLRKTAGAAAKQVEDIELIDKKQGLEPLPEKLASLARFRLQHPELSLKELAEQVpd---gPISKSGVNHRL 299 Lactobacillus ...
3HYI_A        282 KRIIKIA 288 Thermotoga maritima
WKK:WKK_04555 298 RKISELA 304 Weissella koreensis KACC 15510
CDD08773      316 RKIISIA 322 Clostridium sp. CAG:349
EDS19609      300 KKISEea 306 Erysipelatoclostridium ramosum DSM 1402
WP_022001630  301 KKLSEqa 307 Erysipelotrichaceae
WP_002606004  300 AKLRELA 306 Firmicutes
CBK88879      300 AKIKELA 306 Faecalitalea cylindroides T2-87
WP_022093285  300 NRIKTMA 306 unclassified Firmicutes sensu stricto (miscellaneous)
Q5FL56        300 KKLHEIA 306 Lactobacillus acidophilus NCFM
Q1GB32        300 KKLHEIA 306 Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002
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