Conserved Protein Domain Family
SMC_ScpA

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pfam02616: SMC_ScpA 
Segregation and condensation protein ScpA
This is a family of proteins that from part of the condensin complex that regulates chromosome segregation. This is the A subunit, which binds to the ScpB subunit, pfam04079, and SMC, pfam02463, to participate in chromosomal partition during cell division. The condensin complex pulls DNA away from the mid-cell into both cell halves. These proteins are part of the Kleisin superfamily.
Statistics
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PSSM-Id: 280735
Aligned: 5 rows
Threshold Bit Score: 201.995
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P75478   178 LLIDKKFNLHQVDIAKITTQYLHLINTNlNKQAIEP-------ITDYLVITSRIVEQKANNLLqINDIAL--DSDFLDNK 248 Mycoplasmoides pneu...
P74212    16 MAHQGEINPWDVSVIDVIDRFLQDLGIL-NSLDLNFqqqnlprSGQAFLWASMLVRYKADSLHnLEQEPEevLPEAELEE 94  Synechocystis sp. P...
O33208    40 LIFAHQLDVTEVALHQVTDDFIAYTKAIgARLELEE-------TTAFLVIAATLLDLKAARLLpAGQVDDeeDLA--LLE 110 Mycobacterium tuber...
AAA50910  28 LICAHRLDVTEVALHQVTDDFIAYIRRLgPQLGLEE-------TTAFLVIAATLIDLKAARLLpAGRVEDeeDLA--LLE 98 
P35154    21 LINRLEIDIYDIPVAKITEQYLLYVHTM-RVLELDI-------ASEYLVMAATLLSIKSRMLLpKQEEELfeDELLEEED 92  Bacillus subtilis s...
P75478   249 LRDKLVAQLVeykrYRESLDDFEKLRinrlAYfsKD-NDFNRFIQTVDKsntEPVKIEDelpnyvSvlklhHAMNKLMQR 327 Mycoplasmoides pneu...
P74212    95 WPDGLIARLP----RDLENRLRRRTAvp-pLQ--RRrVTLAELIDQIEA---IAVEIEK------S-----EQKPKRVKR 153 Synechocystis sp. P...
O33208   111 VRDLLFARLLqyraFKHVAEMFAELEatalRSypRAvSLEDGFVGLLPE---VMLGVDA------HrfaeiAAIALTPRP 181 Mycobacterium tuber...
AAA50910  99 GRDLLFARLLqyraFKRVAQIFAELEatalRSypHAvFLEERFASLLPE---VMIGVDA------DrfaeiAAFTFTPRP 169
P35154    93 PREELIEKLIeyrkYKDAAKDLKEREeerqKSftKPpSDLSEYAKEVKQ---SEQKLSV------TvydmiGAFQKVLKR 163 Bacillus subtilis s...
P75478   328 WraqflANkNI--------SIQelSIEQVQAEILAtikqFGyhSVSLKRVLLKV--------------N-------HHIS 378 Mycoplasmoides pneu...
P74212   154 A-----RP-QSrrealqiiTEL--AHQENLTELASqleqFL--QTRLPEILPDLphrswvdldtllhcWhhhldpdKLPD 223 Synechocystis sp. P...
O33208   182 AptvatEHl----------HELmvSVPEQAEHLLA----ML--KARGSgqwasf-----------------selvadCTA 228 Mycobacterium tuber...
AAA50910 170 VpivatGHl----------HELkiSVPEQAKRLLA----ML--EARGNgqwtsf-----------------selvadCRE 216
P35154   164 KkinrpMEtTItrq--------diPIEARMNEIV-----------------HSLksrgtrin---------fmdlfpyEQ 209 Bacillus subtilis s...
P75478   379 LMYFITAFVALLVLINNQIIDIEQTSFDDELYICLL 414 Mycoplasmoides pneumoniae M129
P74212   224 KKDKVGVFWALLLLSSQSKVSLAQEEFYQDLQVQII 259 Synechocystis sp. PCC 6803
O33208   229 PIEIVGRFLALLELYRTRAVAFEQSEPLGALQVSWT 264 Mycobacterium tuberculosis
AAA50910 217 PIEVVGCFLALLELYRTRAIAFEQAEPLGVLQVSWa 252
P35154   210 KEHLVVTFLAVLELMKNQLVLIEQEHNFSDIYITGS 245 Bacillus subtilis subsp. subtilis str. 168
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