Conserved Protein Domain Family
Nitrate_red_del

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pfam02613: Nitrate_red_del (This model is not part of the current CDD release)
Nitrate reductase delta subunit
This family is the delta subunit of the nitrate reductase enzyme, The delta subunit is not part of the nitrate reductase enzyme but is most likely needed for assembly of the multi-subunit enzyme complex. In the absence of the delta subunit the core alpha beta enzyme complex is unstable. The delta subunit is essential for enzyme activity in vivo and in vitro. The nitrate reductase enzyme, EC:1.7.99.4 catalyze the conversion of nitrite to nitrate via the reduction of an acceptor. The nitrate reductase enzyme is composed of three subunits. Nitrate is the most widely used alternative electron acceptor after oxygen. This family also now contains the family TorD, a family of cytoplasmic chaperone proteins; like many prokaryotic molybdoenzymes, the TMAO reductase (TorA) of Escherichia coli requires the insertion of a bis(molybdopterin guanine dinucleotide) molybdenum (bis(MGD)Mo) cofactor in its catalytic site to be active and translocated to the periplasm. The TorD chaperone increases apoTorA activation up to four-fold, allowing maturation of most of the apoprotein. Therefore TorD is involved in the first step of TorA maturation to make it competent to receive the cofactor.
Statistics
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PSSM-Id: 515057
Aligned: 80 rows
Threshold Bit Score: 67.7869
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_012856598  44 NPLDENSGEALREIQLFLAHNGESAFIQEYDDVFHnpSYKVVRNTASYYDEgVESGRKQ--LEVKNFLAKTKIRrNEQYF 121 Sulfurospirillu...
1_pfamImport   2 RLISPEVRQDIATLIDQMAALGELEAQAKYDSLFE--RGRSLSLWLFEHVHgESRDRGQamVDLMAQYDMAGFEiNAKEL 79 
WP_014753213  34 TCLPSALRTALNELVGTIADRDIYAAQEDYVLLFD--RTRSLSLNLFEHVHgESRDRGQamVDLLGMYEAAGFVlGAREL 111 Tistrella mobilis
WP_013948860  35 NLIDIEAWRALEPLLAELARLDLFDLQERYVDLFD--KTRRLSLHLFEHVHgESRDRGQamVDLAALYEKGGLTlEANEL 112 Hyphomicrobium ...
Q8FQ41        72 DQLPLPVATQVVEFVDHARVRGLRWLQEHYVETFD--QRRRCSLFLTYYAVgDTRQRGTaiLAFRDTLRALGFDiERDEL 149 Corynebacterium...
Q8NR70        69 DVLPLPVAAHVVEFLDAARVAGLRAMQEAYVETFD--QRRRCSLFLTYYAVgDTRQRGTaiLTFRQTLQQLGFEsERDEL 146 Corynebacterium...
Q6NJB1        36 DDLPKNTRQQFVQFLTAVRVMGRRGMEQHYVECFD--QRRRCSLFLSYYAVgDTRQRGAaiLAFQESLETLGFFlEREEL 113 Corynebacterium...
WP_025251915  52 GSLPVGVDKLLASYLDTAREWGRREMEQHYVDIFD--QRRRCSLFLSYYAVgDTRQRGAaiLAFKESLETLGFFlDREEL 129 Corynebacterium...
WP_009154230  52 RALPDALGEPLAGFLDHVDATPLTELAADYVATFD--HKKRFSPYLTYFAYgDTRKRGMalLRFTHAYRAAGQRlDDGEL 129 Saccharomonospo...
WP_025350217  37 HALPLALGAPVRPLLSHLSGSPPVRLASEYVDTFD--HRKRFSPYLTYFTDgDTRKRGMalLRLKQLYRGAGWQlDDGEL 114 Nocardia nova
WP_012856598 122 kenEDSVGFIFTFMHELIELIM---------NEQKEYDSLQHCLYTEVINPFIDEF 168 Sulfurospirillum deleyianum
1_pfamImport  80 ---PDYLPMYLEFLSHQATINHdemqireeiANISHIVTLLAARLMDKNSHYVGLF 132
WP_014753213 112 ---PDHLPAFLEYLSTRSAAEAte-----laGGIGHIIEALQERLIARNSPYAAIF 159 Tistrella mobilis
WP_013948860 113 ---PDYLPLFLEYLSTLPIEEArp-----llANALHIVSTIEERLAGRNSAYAAVF 160 Hyphomicrobium sp. MC1
Q8FQ41       150 ---PDHLCVVLEAAA--LAEPElfddatevlAAHRDGIEVLRSALDNLDSPYRHLV 200 Corynebacterium efficiens
Q8NR70       147 ---PDHLCVVLEAAA--LADSSlfdaatqvlSAHRDGIEVLRAALDNLDSPYRYLI 197 Corynebacterium glutamicum
Q6NJB1       114 ---PDHLCVVLEVAA--KAEGLahhvatdmlAAHRDGIEVLRVALEHSDSPYSRLV 164 Corynebacterium diphtheriae
WP_025251915 130 ---PDHLCVVLEAAA--KADGEahavatdmlAAHRDGIEVLRLALEQAGSPYAPVV 180 Corynebacterium vitaeruminis
WP_009154230 130 ---PDHLAVVLEFAA-----TVdarigqrllTEHRAGLELIRLGLHEAGSPWAGVL 177 Saccharomonospora marina
WP_025350217 115 ---PDHLAVVLEFAA------TepesglrvlTDYRAGVEVMRAALRESRSLWAGVL 161 Nocardia nova
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