Conserved Protein Domain Family
CsrA

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pfam02599: CsrA (This model is not part of the current CDD release)
Global regulator protein family
This is a family of global regulator proteins. This protein is a RNA-binding protein and a global regulator of carbohydrate metabolism genes facilitating mRNA decay. In E. coli CsrA binds the CsrB RNA molecule to form the Csr regulatory system which has a strong negative regulatory effect on glycogen biosynthesis, glyconeogenesis and glycogen catabolism and a positive regulatory effect on glycolysis. In other bacteria such as Erwinia caratovara RmsA has been shown to regulate the production of virulence determinants, such extracellular enzymes. RmsA binds to RmsB regulatory RNA.
Statistics
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PSSM-Id: 515044
Aligned: 218 rows
Threshold Bit Score: 36.6017
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_013112520         1 MLVLSRRPHESIRLTipenlpPgtVIEITTLEVRANAVRIGLTAPRSVQIARSELVDE 58  Planctopirus limnophila
25_pfamImport        1 MLKISLKQGQYVNIG------D--NIRVVYVGGTGNHGRLMIDAPKDVRIARSTVEQ- 49 
CCZ90698             1 MLRLSVSTEEYLLIG------D--NIKIAFLGGSHNHMRIMIDAPKEVNIIRSSVLEK 50 
CDE55753             1 MLRLTVGIEDYIQIN------E--DIKIIFLGGSQKNMRVMIDAPKEVKIARGKAIKK 50 
CDD34699             1 MLRLTLSTEEYLMLG------D--DIKIVFLGGSNNHLRIMVDAPKEVDIVRSKVLEK 50 
CDE56216             1 MLNFTLKPGDYFMIG------D--DIKVVMAGGTANNCRIMVEAPREYNIVRSRVLEK 50 
CDE35982             1 mVKLTLRPGEFIDIG------E--NVRVIFSGGSANNIHLLVDAPKEVNIARSSAGKK 50 
24_pfamImport        1 MLKLTLKPGEYIDIG------D--NIKVIFSGGSANNIHLLVDAPREVNIVRSSVKKA 50 
wucgs:EUBELI_00423  12 MLKLTIKPGEFINIG------N--DIRVVYSGGTDGNIHLLIDAPRELNIVRSKVLSR 61 
CDE42232             1 MLKLTIKPGEYINIG------E--DIRIVFSGGSANNMHILVDAPREMDIVRSGVLKK 50 
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