1FX3


Conserved Protein Domain Family
SecB

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pfam02556: SecB (This model is not part of the current CDD release)
Preprotein translocase subunit SecB
This family consists of preprotein translocase subunit SecB. SecB is required for the normal export of envelope proteins out of the cell cytoplasm.
Statistics
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PSSM-Id: 515010
Aligned: 137 rows
Threshold Bit Score: 156.859
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1FX3_A        11 TEEQQP---VLQIQRIYVKDVSFEAPNlPHIFQQ--EwKPKLGFDLSTETTQVGd-DLYEVVLNISVETTL----EDsgD 80  Haemophilus inf...
6_pfamImport   1 NEAAQPq-mKMSILAQFVRDMSFENAVaLNGLQs-pEvQPEMQVQVSLDARKRPaeHQYEVITKFKITSTNk--aTN--S 74 
A1B5S4        19 qNAAQPa-vRLQILTQYIRDLSFENAVaQKGLPs-gEvQPEISVQVSLDARKRPaeHQYEVISKFRVQSSNa--tDK--S 92  Paracoccus deni...
WP_025311332  17 AQPTLP---KMQILGQFVRDLSFENIAaQKSTq--sQlQPDIQVQVALDARKRSteGQYDVLMKLKIDSKTkg-eTP--E 88  Roseicyclus elo...
Q28W02        19 AQ--LP---KMQILGQFIRDLSFENAAvQYGTa--tQgQPDIQVQVALDARKRTvdNQYDVIMKLKIESKTkdedAP--K 89  Jannaschia sp. ...
A8LPB5        14 DQQQQPvmpTLKIMAQFIRDMSFENIAaQKGVq--gEgQPDIQVQVNLDAKKRTveKQFEVAIKLNINAKTk--eSG--D 87  Dinoroseobacter...
Q5LLN4         8 AAQQPPq-iQMRVLGQFIRDMSFENVMaQRGAs--gDvQPDVNVQVNLDAKKRStdNQYEIAIKLNITSKAk--gMD--D 80  Ruegeria pomero...
Q16CY7        13 GQQQAP---QMRVLGQFIRDMSFENIMaQKGAp--sDaQPDVQVQVNLDAKKRTadNQYESAIKLNVTSKVk--dGD--A 83  Roseobacter den...
WP_023785801  17 sNEVAV---EAQIVGQFIKDLSFENPSlGKLLEg-pAePPSIKLEINVAAKKLKqdDFFESVIDFKAVASN----KD--G 86  Hyphomicrobium ...
WP_013046505  19 NTQAMR---QLIMHAQYIKDLSFENPNaPNVL-TenTaQPDVEIGVNVGAKMIGe-DQFEVLLNLTAKAKA----DD--T 87  Candidatus Puni...
1FX3_A        81 VAFICEVKQAGVFTISGLEDVQMAHCLTSQCPNMLFPYARELVSNLVNRGTFPALNLSPVNFDALFVEYMNRQ 153 Haemophilus influenzae
6_pfamImport  75 ALYLLEIDYGGIFHIEGVPEDQMHPFLLIECPRQLFPYVRRIVSDVTRDGGFPPFNLDPVDFVALYRAELARR 147
A1B5S4        93 PLFLCELDYGGIFHVEGVPEDQLHPFLMIECPRMMFPFVRRIVSDMTRDGGFPPFNMDPVDFVALYRQEIARR 165 Paracoccus denitrifica...
WP_025311332  89 PIFLLELEYGGIFSIENVAEEQLHPFLLIECPRMLFPFVRRIVSDVTRDGGYPPLNLDQIDFIALYRQQLAQR 161 Roseicyclus elongatus
Q28W02        90 SIFLIELEYGGVFLIENIAEQQLHPFLMIECPRMLFPFVRRIISDMTRDGGYPPLNLDQIDFVALYRQQIAAR 162 Jannaschia sp. CCS1
A8LPB5        88 MIFGLELDYAGIFFIDNVPDEQMHPFLLIECPRMIFPFVRRIVSDVTRDGGFPPLNLDQIDFVALYRQEIARR 160 Dinoroseobacter shibae...
Q5LLN4        81 VLFVFEIDYCGIFHVEGVPNEQLHPFLLIECPRMLFPFLRRIVSDITRDGGYPPLNLDNIDFMALYRSELARQ 153 Ruegeria pomeroyi DSS-3
Q16CY7        84 TLFVLELDYVGIFHVDNVPDEQLHPFLLIECPRMIFPFLRRIVSDITRDGGFPPLNLENIDFLSLYRNELARR 156 Roseobacter denitrific...
WP_023785801  87 TIYDLEVLYAGLFRIKNMPEAALEPFLLVNCPTLTFPFLRRLVADITREGGFPPLLLDPIDFGQLFMRRKQDm 159 Hyphomicrobium nitrati...
WP_013046505  88 ALFLVDLTYAGLVSAPNTPENELNPLIMIEAPRLLFPFARAIVSDMTRDGGFMPLNIQPVDFVAVYQHNLARQ 160 Candidatus Puniceispir...
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