8UU4,6GZX,5ZEP,3TQM


Conserved Protein Domain Family
Ribosomal_S30AE

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pfam02482: Ribosomal_S30AE (This model is not part of the current CDD release)
Sigma 54 modulation protein / S30EA ribosomal protein
This Pfam family contains the sigma-54 modulation protein family and the S30AE family of ribosomal proteins which includes the light- repressed protein (lrtA).
Statistics
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PSSM-Id: 514957
Aligned: 657 rows
Threshold Bit Score: 29.0326
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
8UU4_w          4 YNIRGENIEVTEPIRDYVEKKIDKLERY---F---TEtpdanVHVNLKvy-------sDKNA---K-VEVTIpL-PNLVL 65  Listeria innocua
WP_012993799    3 ITITGKGMNIGEQLHNRVVSKLSKFNRY---FgddAK-----VSVKVRp--------eG-DD---KcMEITIr-vSRHIY 61  Mageeibacillus...
WP_013560465    5 VEIYPKNLELTTHIADYITKKASKLDRYlsdI---EE-----TRVDLEyq------ksMRNPadrQvAQITIrGr-GYIL 69  Anaerolinea
WP_014434904    3 VMVNGRNIEVTDYMREYVTKKVGRLERYlpqI---GE-----VRAELTqn-------mTRSAddrFtAQITIwAn-GQIL 66  Caldilinea
WP_012257276    3 LTIKSRNGKISDRQRAHIEEKLSKLERY---LhgiTS-----ITVEVQheqqrnagevYR-------VQTTLvAeHGVIL 67  Chloroflexus
EHM13758        3 IRFTTHNAKIPAEMKEYMEGKLGRMEKF---FsriLD-----MQVAVKt--------dKKDF---VtVEITAd-aNGVVL 62 
WP_013048568    3 VRFVARNAVIDDELRSYMREKVSKLGKF---FnriLD-----NQVLVSf--------gRGMH---N-VEITSn-aNGVIM 61  Aminobacterium
75_pfamImport   1 IRFVTRNVEISDASKGYMESKLSKLEKF---FdriLD-----TQVVVSf--------tRGMH---V-VEITSn-vNGVIM 59 
WP_006300793    3 VRFVTRNVELVDSIKEHMEKKLGKLDRF---FdriLD-----TQVAVDf--------kRGMF---V-VEITSn-vNGLVM 61  Aminomonas pau...
WP_334138206    3 VRFVTKHVELQDEMKEYMERKLSKLEKF---FdriLD-----VQVEVDf--------tRGMY---V-VEITAd-vNGVIM 61  Thermovirga li...
8UU4_w         66 RAEE-TS-GDLYASIDLIVDKLERQIRKHKTKV 96  Listeria innocua
WP_012993799   62 RSEA-VA-GDVFTALDLAMAGMERQIRKQKSKI 92  Mageeibacillus indolicus
WP_013560465   70 RTQErS--DDILTAFDTALDNLQRKMERFKGKR 100 Anaerolinea
WP_014434904   67 RAEE--StSDIFASIDATVDKISSQIRRFKGRR 97  Caldilinea
WP_012257276   68 RAEE-RA-PDLYAAIDEVQEVLQRQIARYKDKY 98  Chloroflexus
EHM13758       63 RGEQ-RD-PDLRKAFDLALKVLERRIRRHKEYL 93 
WP_013048568   62 RSEE-SA-PDMRKAFDKALKNIERQIKRHNDYL 92  Aminobacterium
75_pfamImport  60 RGED-YA-PDIRKAFDKALKNIERQIKRHKSYL 90 
WP_006300793   62 RGED-YA-PDLRKAFDKSLKNIERQVKRHKDVL 92  Aminomonas paucivorans
WP_334138206   62 RGEE-YA-QDIRKAFDKGLKNIERQVKRHKEFL 92  Thermovirga lienii
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