Conserved Protein Domain Family
Ycf4

?
pfam02392: Ycf4 
Ycf4
This family consists of hypothetical Ycf4 proteins from various chloroplast genomes. It has been suggested that Ycf4 is involved in the assembly and/or stability of the photosystem I complex in chloroplasts.
Statistics
?
PSSM-Id: 426753
Aligned: 51 rows
Threshold Bit Score: 230.904
Created: 19-Apr-2021
Updated: 29-Sep-2021
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
P49179              8 DDVLIYSMAEVRRTSNLFWAVFTLLGSLGLLFVAISSYLGM----DLFFISEKISdfsfipdfiyFPFIPQGATMAFYGI 83  soybean
Q6YXR4              6 DWLWVEPIMGSRRVSNFCWAAILLFGALGFFFVGISSYFGK----DLIPFLSSQQ----------ILFVPQGVVMCFYGI 71  Physcomitr...
XP_002993884        3 EWLRVEPIEGSRRVGNFFWARATPPGALGFFLVGIPSYLGR----DLTPFPLPHQl---------IPFVPQGIVMCFYGI 69  Selaginell...
Q2MI89              6 DDIWIELITGSRKISNFCWALILFLGSLGFLLVGTSSYLGR----NLLSFFPPQQ----------IIFFPQGIVMSFYGI 71  tomato
P62720              6 EHIWVELLKGSRKRGNFFWACILFLGSLGFLSVGISSYLGK----NIISILPSQE----------ILFFPQGVVMSFYGI 71  bread wheat
jgi:MICPUN_104909  77 DNLIIDPVVGAKRFSNYFWAGVVSIGATGFLITGASSYFEH----NLLFFLDASE----------IKFFPQGLVMSFYGV 142 Micromonas...
AJP09454            5 EPIIRYEVPGARRFGNYVWGSLMCIGGLGFLITGISSYLDF----PFLSLLKSPN----------IQFFPQGLVMCFYGV 70  Chlorella ...
O20030              6 iLIRRYIIVGERRFSNYWWAIVIFLGSCGFLATGICSYLGIpnwlSLLNIGTTFSsetetlasgiVPFFPQGLLMSFYGS 85  Chlamydomo...
CAV31310            4 NLLKRDIVVGSRRFSNFFWTFILFFGGVGFLLTGISSYFQK----NLLFFINSTE----------LSFLPQGLVMTFYGV 69  Ectocarpus...
A0T0A2              3 NEIRQDKIIGSRRFSNYFWAFFLLVGGLGFLLAGISSYFKV----NLLPFTNTTE----------LVFIPQGLVMMFYGA 68  Phaeodacty...
P49179             84 AGLFSSFYFGSIIFWDIGGGFDIFNKKGKKVRFVRWGFPGKNRRIILEIPMNELHSIRIitEVKeEGIFTRtstfeSIVY 163 soybean
Q6YXR4             72 AGLFLSFYLWCTIFWNVGSGYNKFDKKKKIVSLFRWGFPGENRRICINFFMKDIQGIRM--EVQ-EGIYPR-----RTLY 143 Physcomitr...
XP_002993884       70 SGLSSSLHSWRTIPWSVGSGCDRYDKQGGMIPSPRWGFPGYNRRIYTRFPLGYVQAIRM--EVR-EGIDPR-----HVPR 141 Selaginell...
Q2MI89             72 AGLFISSYLWCTISWNVGSGYDRFDRKEGIVCIFRWGFPGKNRRIFLRFLIKDIQSVRI--EVK-EGIYAR-----RVLY 143 tomato
P62720             72 AGLFISSYLWCTILWNVGSGYDRFDRKEGIVCIFRWGFPGIKRRVFLRFLMRDIQSIRI--QVK-EGLYPR-----RILY 143 bread wheat
jgi:MICPUN_104909 143 AGSLLATYLWLTINWDVGAGYNEFNKDEGIMRIFRYGFPGKNRRINLVTPLQDIQAVRV--EIA-DGVNPR-----RVVY 214 Micromonas...
AJP09454           71 LGLVLGIYIWLIILWNLGEGFNEFNLQTGYVRIFRWGFPGKNRRIDLQYPIQEIQSIRV--EIQ-EGINPK-----RIIY 142 Chlorella ...
O20030             86 LGFLLSIYWSLLIFWNVGGGFNEFNKKEGFVRIFRWGYPGKNRKIDLSYSLKDIEAIRV--ELK-QGLDAQ-----RTIY 157 Chlamydomo...
CAV31310           70 VGISLSIYIGLTIFWDVGSGYNEFDKQNELIRIVRRGFPGKNRQILLVYAFKNIKSIKL--NIQ-DGINPK-----RIIY 141 Ectocarpus...
A0T0A2             69 LSLGISIYTLLTIILDIGSGYNEYNRIENLVKVVRKGFPGKNREILLTYSLSNVRAIGI--KIT-EGLNPT-----RSIY 140 Phaeodacty...
P49179            164 LETIEQGF-I-PLTRIEDN-LNGTQIAHKAGELSVFLGVPL 201 soybean
Q6YXR4            144 MKIKGQQD-I-PLTRIREN-LTLGEIEEKAAELARFLRVSI 181 Physcomitrium patens
XP_002993884      142 MRMEGQQQkVlPIRGAGEH-PIPADTEREAAESAR------ 175 Selaginella moellendorffii
Q2MI89            144 MDIRGQGS-I-PLTRTDEN-LTPREIEQKAAELAYFLRVPI 181 tomato
P62720            144 MEIRGQGI-I-PLTRTDDKfFTPREIEQKAAELAYFLRVPI 182 bread wheat
jgi:MICPUN_104909 215 VRCKNKSD-I-PLTRIGQP-LTLAEVEKQAADLAKFLQVPI 252 Micromonas commoda
AJP09454          143 LKLRGNRE-I-PLTRAGQP-LSIQQIETQAAELAKFLQVSL 180 Chlorella variabilis
O20030            158 LRLKGKRE-I-PLTGIGQP-LTLKEIEKQASELANFLQVSL 195 Chlamydomonas reinhardtii
CAV31310          142 LCTKDQRE-I-PLTPVEQP-RSLEVLENEASELARFLNINL 179 Ectocarpus siliculosus
A0T0A2            141 LCLKDERN-I-PLTPVQEP-TAISNLEEEATDLAKFLDLRL 178 Phaeodactylum tricornutum CCAP 1055/1
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap