Conserved Protein Domain Family
IncFII_repA

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pfam02387: IncFII_repA 
IncFII RepA protein family
This protein is plasmid encoded and found to be essential for plasmid replication.
Statistics
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PSSM-Id: 426750
Aligned: 4 rows
Threshold Bit Score: 451.611
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q5WQ00           3 KRKKYVDNPYPKFVQPKNHKKRPAFIRYAMRCAAQTDVARNELYYTNPlknpitGCVLHRKRRLNEHRARALRAVVQAML 82  Buchnera aphi...
NAM:HDEF_p0001   2 TRKSYVFNASPVFTPPASEKQRPAFIRYAMQCASDKDVARSELLYILQ------GTIPTRSRRLNEHRARALRAMALAML 75 
P56936           3 IRKCYINNPNPFFTPPKNNKRRPSFICYAMKRASEIDVARCELNYILQiknikiGFPVKRFRRLNEHRACAMRAMVLAML 82  Buchnera aphi...
Q89B46           3 KRKNYVNNISPLFTPPKGDKRRPAFINYALEQAKKIDVARSELNYILKlrdpktGSIIPRHRQLNEHRAAAMRVIVPAMI 82  Buchnera aphi...
Q5WQ00          83 YYFNIASMLVMASVEKLSDVCGLSTYSSAGNKSITRASRLITQFMEPMGLISCEKIWDKILGMYIPKIIYLKPLFFMLFD 162 Buchnera aphi...
NAM:HDEF_p0001  76 YHFNIASGLVMASVEQLSDECGLSTVSDAGNKSITRASRLLTDFLEPMGFVHCEKVWDRIMESYIPKLITLTPLFFLLFD 155
P56936          83 YHFNISSDLVQASVEQLSDECGLSTLSKAGNKSITRASRLITNFMEPMGFVTCKKTWDKILGNYMPKMITLTPLFFMLFG 162 Buchnera aphi...
Q89B46          83 YHFNITSDLVQASIEQLADECGLSTVSKSGNKSITRASRLISQFMEPMGFIKCKKKWDKILGCYMPKIIMLTPLFFELIG 162 Buchnera aphi...
Q5WQ00         163 ISKIRLKRVRIKQLEWINSQLKKKGEYPITLLEIEKQAKEKHIHSALLFRKSKYIIKKQKNKAKKFLELDEKYAKSYILN 242 Buchnera aphi...
NAM:HDEF_p0001 156 VSSEKLEKAQHQQMGWINKGLMEKGEESITLVEARRRAKEQHIKRAFEYRKSLHAMNKKRKLARRMAKLDEQTAKQTLLQ 235
P56936         163 VSEKKLMDAKKQQLGWINKNLISKGFKPITMIDAKRRSKDTQIKNIFQYRISKHAFYKKKRNAQRLISLDEKEARQTILR 242 Buchnera aphi...
Q89B46         163 ISKEKLNNAKKQQLGWLNTKLIERGLKPLSFSDAKLVSREKQINKILELRNNFHLLQRKKRYAKKLFKLDEKDIRQKIIK 242 Buchnera aphi...
Q5WQ00         243 NLVKKYSTKELCKLGLTKLKRKVNCEYFRLKKLAQ 277 Buchnera aphidicola BCc
NAM:HDEF_p0001 236 KIIQRYSLVELNEMGPKGLRNQVNMEYHHLRKVAS 270
P56936         243 ALVAKYSITELTKLGPNGLKKQVNISYYYLRKIAT 277 Buchnera aphidicola str. APS (Acyrthosiphon pisum)
Q89B46         243 YLVSKYSSSELAQISLQEFKKQVNIEYFYLRNLAN 277 Buchnera aphidicola str. Bp (Baizongia pistaciae)
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