Conserved Protein Domain Family
TRA-1_regulated

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pfam02343: TRA-1_regulated (This model is not part of the current CDD release)
TRA-1 regulated protein R03H10.4
This family of proteins represents the protein product of the gene R03H10.4 which is located near a sequence that matches the TRA-1 binding consensus. TRA-1 is a transcription factor which controls sexual differentiation in C.elegans. R03H10.4 shows male-enriched reporter gene expression and acts as a direct target of TRA-1 regulation.
Statistics
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PSSM-Id: 514873
Aligned: 66 rows
Threshold Bit Score: 92.3999
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EFO97479      23 TNCSCPDILTLGWWGRstkcflaienpkkiiqgsgNIETyEEGIGCTRKIMCyKLNYDDGLMLDFKETEIP---IPSDKD 99 
8_pfamImport   1 DQCECPDLLDRLNWPEr-----------------sDILY-TEEAGCFRNITC-LTYKWSWVRFNYNETEIT---RPVNAT 58 
EFO87215      21 EVCECPDLLDQLKWPKk-----------------nETLY-TEEAGCFRNITC-QTHEWSWVRFNYNESEVP---RPADTD 78 
EFO99639      24 VVCECSDIRDLITRDEsen--------------asEPIY-SEGAGCERNVTC-GFDESTYVRIYLHQSEIEfydRPDWGM 87 
EGT49804      23 SDCSCGDLRQLELNGTl------------------NAPY-SEGPGCTRSITC-AKKWQTYVVFYWHNSEID---RPSDAR 79 
3_pfamImport   1 DYCECSDIIDLLDEYAdr----------------aNIPM-TEKVGCVRNITC-DADDQTYVTIYFSASEIV---RPDDNN 59 
XP_003100171  29 DYCECSDIIDLLDEYAdr----------------aNIPI-TEKVGCVRNITC-NADINTFAGFYFSASEIV---RPDGNT 87 
EFP03416     162 PPCECSDIVDLFDDHSdk----------------sKIPV-TDKDGCDKSITCdADEYFTYITISFNGSEIV---RPDDSH 221
7_pfamImport   1 DHCECSDIVDILRRPFddd--------------kdGILI-SDKVGCVRNITC-RDSTYTYVIISFDESVID---RPDDSL 61 
1_pfamImport   1 DYCECSDITDILWKSYgtd--------------eyDILI-SEKGGCVKNITC-HDSVLTYVTTNFSTSEIV---RPDDSH 61 
EFO97479     100 PnndwlqapTQDEMYGMVSGLIDVFSYFGIVCENGTWYATKYPHGIVY------ANAGSGFTGPSDEYNGKKSKIDYFRC 173
8_pfamImport  59 Ywgva-etiDTTKPAEPQKSIVNLFEFFGMICENNDWYITKYPYGFSYvqsngtGTYVYLMKNNNEELDGKKSKILVWNC 137
EFO87215      79 Ewgaa-etiDTTKPAEPQKSIVNLFEFFGMICENNEWYITKYPYGFSYaqfnetGTYIFLMKNNNGELDGKKSKIWQFAW 157
EFO99639      88 Gyl-----dSMGSDSEIFGKPVNVFSYFGMVCEDGDWYATKYPFGVYYa----tKENWPNRVGLNGKVDGLKSLIAYIAC 158
EGT49804      80 Ddyg--tadTNNIQNSLDQSATDVFALFGMICENQTWFITKYPFGVSY------YNSDDVSVAIGESLDGKKSEIYDFKC 151
3_pfamImport  60 Ndig--yvdSTNLQTGVPRGPLDIFSSFGMSCENKKWYVTKYPFGLSY------EKKDWKLEYITGDWDGKKSEIKFIAC 131
XP_003100171  88 Dnia--yvdSINRQTGVPRGPLNIFSSFGMSCENKKWYVTKYPHGLSY-------YTKDSEEFISGDFDGKKSEIGKIFC 158
EFP03416     222 Kdnea-yvdSINHQTGEPRGPLDIFSFYGMSCENKKWYVTKYPFGLHYy-----AEDHVEFKHITGDLDGKKSEITKIAC 295
7_pfamImport  62 Ndia--yvdSADLITGVRTGPVDVFSLFGMSCENEKWYVTKYPFGLSY-------NTVNSTKYITGGLDGKRSEIGKVIC 132
1_pfamImport  62 Kdtka-yvdSCEIYTGIRKGSIDVFSFFGMTCENNKWYVTKYPFGVHY------ITKDSETKFITEGLDGKRSEIESVSC 134
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