Conserved Protein Domain Family
TRA-1_regulated

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pfam02343: TRA-1_regulated 
TRA-1 regulated protein R03H10.4
This family of proteins represents the protein product of the gene R03H10.4 which is located near a sequence that matches the TRA-1 binding consensus. TRA-1 is a transcription factor which controls sexual differentiation in C.elegans. R03H10.4 shows male-enriched reporter gene expression and acts as a direct target of TRA-1 regulation.
Statistics
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PSSM-Id: 426731
Aligned: 66 rows
Threshold Bit Score: 92.7854
Created: 26-Apr-2021
Updated: 29-Sep-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EFO97479      23 TNCS-CPDILTLGWWGRstkcflaienpkkiiqgsgNIETyEEGIGCTRKIMCy-KLNYDDGLMLDFKETEIPIPSDKDP 100 Caenorhabditis ...
9_pfamImport   1 NMCR-CSDLMSLVEDSSe-----------------nILYT-FNGNHCSSNFTC--NADSQTFIRSSFDGSEIPGIGNRTG 59 
EFP10686      32 TDCSsCPPFTSLFYSHYan---------------asNFETyYKVSDCVYNYTCltVQQKENYVIV-NATDDIKvatg--- 92  Caenorhabditis ...
EGT40915      25 TNCD-CPDFTTLFNDQGk-----------------eDLLF-TQGEGCTFNSTC--KYVAQGAVQALWKDSEIETPTETRD 83  Caenorhabditis ...
CAP39026      23 DSCE-CPEFSSLRYERYdv----------------sYLQF-TQLAGCAANATC--VNPNNFMMLSGFSSSEIEHPPETPD 82  Caenorhabditis ...
XP_002635700  23 DSCE-CPDFSSLRLSEAda----------------sDYQF-TQLAGSAANATC--VSPNNFVMASQFNETEIPLPPEANR 82  Caenorhabditis ...
XP_003095042  24 KKCE-CQPFTDLVQDSNts----------------lYMSY-TKGAGCDNKIFC--KNDSILTLASYFFSSELEMPENAMA 83  Caenorhabditis ...
EGT34976      23 HTCA-CEDINTLHSGKP-------------------DIVY-EKGVGCSQSLKC---TSAHNIISMSKELSNIPdvidg-- 76  Caenorhabditis ...
Q9TYL1        23 DSCSmCPDIQSIFSNKTg-----------------sTILY-SEGPGCVRNLTCt-VKGTFTSIYSAFSVSDVPRPENIAD 83  Caenorhabditis ...
Q2V4S8        22 DTCF-CPDIRSEHYREYgghwq---------seepdDRLTsSEGPGCIRNLTC--MLSFDTYFSSGFQWSNIPVPADSAG 89  Caenorhabditis ...
EFO97479     101 nnd------wlqAPTQDEMYGMVSGLIDVFSYFGIVCENGTWYATKYPH------GIVY---ANAGSGFTGPSDEYNGKK 165 Caenorhabditis ...
9_pfamImport  60 am---------lIPTIPEEDQPEHSSINIMVELGIYCHEGEWYVTQYPY------GVTY---MDDTGTKYITGEDWGGKK 121
EFP10686      93 --------yfmrVHLTDKPYPEYGDPINVFDALGFQCIDSKWYATKFPY------GLWH-----NGATRNMSAADLVGIK 153 Caenorhabditis ...
EGT40915      84 ------------NFFSVIDSEEPVATFDMFSLFGIICKKGAWYITKYPS------GIWYw-tLDSEEVSFGTAEELDGKK 144 Caenorhabditis ...
CAP39026      83 nf---------fIVTSGRNSSILASSFDLFPYFGIICEGGSWYATKYPM------GIATqsvTGGGLIYTNYDESYDGKK 147 Caenorhabditis ...
XP_002635700  83 ff---------mIPALGRNALIPASSFELFSYFGVVCDNGSWYATKYPM------GISYvkvNEDIFTNTTYVESYDGKK 147 Caenorhabditis ...
XP_003095042  84 ------------AFIMYPPNDVKYDEFEAFSQFGIICENGMWSTTKYPKvaylvdGIVH--------DFPLPFSQYDGKK 143 Caenorhabditis ...
EGT34976      77 -------sialfYNPSIPRNERPVLTVEFFSDFGLVCEDGRWFVTKFPM------GIHN-----GLGPFSADAMNGKGYK 138 Caenorhabditis ...
Q9TYL1        84 hpevdtmiiyatSVGGSGGSGGVGVVIDLYSFYGIVCEDAQWYATKYPY------GISYt-dSDGGWMLIGFNGELDGKR 156 Caenorhabditis ...
Q2V4S8        90 sl---------wVHAQKPGSTPPGSFADLQELFGIICEDLKWKITKFPY------GYVYm-qKDTFEHVHVDASKIVGKS 153 Caenorhabditis ...
EFO97479     166 SKIDyFRC 173 Caenorhabditis remanei
9_pfamImport 122 SKVLgFRC 129
EFP10686     154 LPIQaMSI 161 Caenorhabditis remanei
EGT40915     145 SKIYyAMW 152 Caenorhabditis brenneri
CAP39026     148 SRISvLAW 155 Caenorhabditis briggsae
XP_002635700 148 TRIVwFAW 155 Caenorhabditis briggsae
XP_003095042 144 SGIArFAC 151 Caenorhabditis remanei
EGT34976     139 ATIQyLSC 146 Caenorhabditis brenneri
Q9TYL1       157 SLIKiLGW 164 Caenorhabditis elegans
Q2V4S8       154 YKVE-LKT 160 Caenorhabditis elegans
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