Conserved Protein Domain Family
AUX_IAA

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pfam02309: AUX_IAA (This model is not part of the current CDD release)
AUX/IAA family
Transcription of the AUX/IAA family of genes is rapidly induced by the plant hormone auxin. Some members of this family are longer and contain an N terminal DNA binding domain. The function of this region is uncertain.
Statistics
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PSSM-Id: 514851
Aligned: 92 rows
Threshold Bit Score: 205.951
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EFJ32574      19 ETELRLGPPkskepaknnvaageapkwqhekveqpkseksnepdlsggnvfwqaaarmipqevqapspaahqemshtayc 98 
Q8LQ74        48 kLDLKLGLP----------------------------------------------------------------------- 56  Japanese rice
XP_010232290  47 klELKLGLP----------------------------------------------------------------------- 55 
XP_044977001  48 KLELKLGLP----------------------------------------------------------------------- 56 
XP_044349872  48 KLELKLGLP----------------------------------------------------------------------- 56 
XP_003571137  35 tlQLSLGLP----------------------------------------------------------------------- 43 
XP_002277798  33 kLELRLGPP----------------------------------------------------------------------- 41 
XP_015162257  25 kLELRLGPP----------------------------------------------------------------------- 33 
XP_006853701  54 ETELRLGPPgdyqalncp-------------------------------------------------------------- 71 
XP_003530078  13 klELRLGPPgeeslne---------------------------------------------------------------- 28  soybean
EFJ32574      99 nvastaamaanknkrvfseaigsngqfvegrsvmpnppgivvagspsnpGtgnggasssnpgvpVAPAPSQpsngkasat 178
Q8LQ74        57 -------------------------------------------------Gfieddea-etlrdyRLQQEspslsls---- 82  Japanese rice
XP_010232290  56 -------------------------------------------------Glaeeetp-atsrenMIHQErpalslg---- 81 
XP_044977001  57 -------------------------------------------------GlvkeepaassrdnrVVHQEspalslg---- 83 
XP_044349872  57 -------------------------------------------------GlveeepaassrennRVHQEspalslg---- 83 
XP_003571137  44 -------------------------------------------------Ggsrrta------------------------ 50 
XP_002277798  42 ------------------------------------------------------------------GEDRSllslsylps 55 
XP_015162257  34 -------------------------------------------------Ngdws----------sseKDETffpfsy--- 51 
XP_006853701     --------------------------------------------------------------------------------    
XP_003530078  29 ---------------------------------------------------------sirkcnrERRRNESpltlgcfst 51  soybean
EFJ32574     179 applmpssmYPwnsskqlpaawrmgleqskssfgpfpsssrmapkmgdvdnnnsnsgspnssGL----TSHNKEdateea 254
Q8LQ74        83 ---ffpkhsKTtsst--------------------------------------------tttTG----AKRGFIdtvedk 111 Japanese rice
XP_010232290  82 ---ylplhsMTtas---------------------------------------------tttTG----AKRGFLdtveak 109
XP_044977001  84 ---yhphkhSTanp---------------------------------------------tttTG----AKRGFLdtveak 111
XP_044349872  84 ---ypprhsTTitt----------------------------------------------ttTG----AKRGFLdtveak 110
XP_003571137  51 ---------------------------------------------------------------crdkaKKHSAGdssvls 67 
XP_002277798  56 masithlhtNSh-------------------------------------------------------gAKRGFQdtleak 80 
XP_015162257  52 ---iskdnhAQkfssflqlqstaqkqs--------------------qmvqessqtvctktaDLqsteKKKAFSqtatvh 108
XP_006853701  72 -----------------------------------------------------spvskngsfCG----AKRGFQdtvask 94 
XP_003530078  52 qkiftsdtpGPggamlpsawpstsyhhqdqakakas-------sflqlqsspqnmilmgkdvsqfscvEKKSFSpscanp 124 soybean
EFJ32574         --------------------------------------------------------------------------------    
Q8LQ74       112 tegyndqkqqaragcgkelaveemiaavs--------------------------erkkgccpppppphgapatparnrp 165 Japanese rice
XP_010232290 110 aegyneqkqqaraacgkeltveentaaase------------------------rkkgccppppshappatparnngnrp 165
XP_044977001 112 aqghekeqkqqaraaacgkelaaeentaaaav-------------------gerkkgccppppshappaaaparnignrp 172
XP_044349872 111 aqgyekeqkqqaraaacgkelaveentatvg---------------------erkkgccpppppphappatparnignrp 169
XP_003571137  68 lgystaipspqsqgkaqgs---------------------------------------------qdepaatrnavapnnn 102
XP_002277798  81 pwprvslsssssafekqnhqpkssylqypvvpqtlgaivde-sskprptsmadqaqqykdkmacsvaadasvsantavpn 159
XP_015162257 109 ns------------------------------------------------------------------------------ 110
XP_006853701  95 patsernqklsgeeagllrqqpafslyqkslhqktptfllskqaspstlvretasakmetqkrderetvlsapsnlkkps 174
XP_003530078 125 av------------------------------------------------------------------------------ 126 soybean
EFJ32574     255 ---vpsaspPVVGWPPVQSFRKNLvAHPP------PPQHKStetttkngvssntsapaPAPAAANAa--------tASPL 317
Q8LQ74       166 qtqgrgaaaPVVGWPPIRSFRRNLaSSSS------SKHSPE-----------------PQ---NDNanakv-tltcKKNP 218 Japanese rice
XP_010232290 166 pargrgaavPVVGWPPIRSFRRNLaTSTS------SKQPPE-----------------QQ---NGEadakv-klncNKSP 218
XP_044977001 173 qargrgaavPVVGWPPIRSFRRNLaSTSA------SKQVHE-----------------PQ---IAEadaka-alncKKSP 225
XP_044349872 170 qargrgaaaPVVGWPPIRSFRRNLaSTSA------SKQPPE-----------------PQ---IGEanaka-vldcKKSP 222
XP_003571137 103 gprtrspgaPVIGWPPVRASRRNL-ATSS------SKASLE----------------------QQHmkkavkaeetRRAP 153
XP_002277798 160 ssqkriehaPVVGWPPIRSFRKNLvNSSS------SKPESE-----------------SPNKIPEEtgygk-sessKTGL 215
XP_015162257 111 -aqkrtapaPVVGWPPVRSFRKNLaSSSS------VKSATE-----------------TQNVVPNKsankkpmeicQKGL 166
XP_006853701 175 mgsseeragRVVGWPPIRSFRKNL-TSTS------SKPQPQp----------------INEPINGSsenlekqeapKKGM 231
XP_003530078 127 --skrtasgPVVGWPPIRSFRKNIaSGSTsnsklpSGSQQQ-----------------HQNVVPGKvasqkptdnsGKGL 187 soybean
EFJ32574     318 FVKVYMDGVPIGRKVDLKANNSYDKLSTVLEDMFLRFITGQ------------------NGTPEVSSIRdPGEKkLNFLQ 379
Q8LQ74       219 LVKINMDGIPIGRKIDLAAYNSYDGLSSAVKQLFHGFLQaqk--------------dqtNAQ-IAQQGA-DDKIfYQLLD 282 Japanese rice
XP_010232290 219 LVKINMDGIPIGRKVDLAGCDSYERLSLAVKELFHGFLEaqr--------------epsSAE-SAQQGA-DRKIfSQLLD 282
XP_044977001 226 LVKINMDGIPIGRKVDLAACDSYERLSLAVKDLFHGFLEvqr--------------dtpRAE-RAQQGA-DEKIfSQLLD 289
XP_044349872 223 LVKINMDGIPIGRKVDLAACDSYERLSLAVKDLFHGFLQvqr--------------dpsKVE-RTQQGA-DENIfSRLLD 286
XP_003571137 154 FVKINMDGIPIGRKIDLTALDSYEKLCVAVDKLFRHLLAaqn--------------dppAAG--TECTQ-EVVAiSGLLD 216
XP_002277798 216 FVKINMDGVPIGRKVDLKACDSYEKLSYAVDDLFRGLLSaqn--------------essAGTGNENKME-EAKTmAGLFD 280
XP_015162257 167 FVKINMDGIPIGRKVDLKAYDSYDKLSSAVDQLFRGLLAaqn--------------npsTGG-SEKKED-GETAiSGLLD 230
XP_006853701 232 FVKINMDGIPIGRKVDLNAYRSYEKLSGAVDELFRGLLAaqs--------------dssASS--TQSGI-GEKl-RGLLD 293
XP_003530078 188 FVKINMDGVAIGRKVDINAYDSYEKLSSAVDELFRGLLAEMklshiassqccsgqrdscAGG-IQNKEQ-EEKSnTGLLV 265 soybean
EFJ32574     380 SS-DFVLTYEDKDGDLMLVGDVPWGMFTGTVKRLRIMKGSEAIGLA 424
Q8LQ74       283 GSgEYTLVYEDSEGDRMLVGDVPWKVFVSTAKRLRVLRSSELshtl 328 Japanese rice
XP_010232290 283 GSgEYTLVYEDNEGDRMLVGDVPWNVFVSTAKRLRVLRSSELSral 328
XP_044977001 290 GSgEYTLVYEDNEGDRMLVGDVPWNVFVSTAKRLRVLRSSELshgl 335
XP_044349872 287 GSgEYTLVYEDSEGDRMLVGDVPWNVFVSTAKRLRVLRSSELshgl 332
XP_003571137 217 GTgEYTLVYEDYEGDRVLVGDIPWGMFVSSVKRLRVLKTSDLsssl 262
XP_002277798 281 GSgEYTLVYEDNEGDRMLVGDVPWHMFVSTVRRLRVLKSSELAilc 326
XP_015162257 231 GSgEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSDLSTLT 276
XP_006853701 294 GSgEYTLVYEDNEGDRMLVGDVPWEMFVSTVKRLRVLKSSELSGLC 339
XP_003530078 266 GSgEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSDLpaft 311 soybean
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